Transcript Information: R_Transcript_378584.p2


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73011843818875
Replicate 21.3197674547387
Replicate 30.65447821703293
Condition 2: 8 Hour
Replicate 10.83951536961983
Replicate 20.38332940299175
Replicate 30.62234093555613
Condition 3: 24 Hour
Replicate 11.1806872288534
Replicate 20.63015025401649
Replicate 31.0005807856867


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_378584.p2 GENE.R_Transcript_378584~~R_Transcript_378584.p2 ORF type:complete len:175 (+),score=10.32,zf-RVT|PF13966.2|3.1e-16,zf-RVT|PF13966.2|6.7e+03 R_Transcript_378584:2895-3419(+)
ATGCTACAGAAAGTAGTGGAGGCTAAAGAGGAGATGGCTATGACCGCAGGGGTTAGTACTCTAAATACCAGAAAGATTAAAGATTTTTATGAGCTAATGAGTAATAAAACCTCTAAAGTCCCTTGGTATCAGATGGTATGGACGAGTTTTGCTGGGCCTCAAACAAAAATCATCTCTTGGCTTTTGATGAACCAGAAACTGGCAACTAGAGATAAAATTACACGATGGATTCCCAATTGTGAACTAATATGTCCTCTGTGCAACAAGGATGATGAAAGTTGTGAACATCTATTCATTCATTGCCTATTTACTAAGGAAGTGTTTGCTAGAGTTTGGCAGGGTCCGTGTTGCACTTGGACTCAGGTGAATAGTTGGCAACATTTGGCGGAGAAGTGTATACAAAAGAGCAGGGGTAAAACCCCAAAAACCAAATACCTGAAAGCATCTATAGTAGAGTCTTGTTATCACATTTGGTGGGAGAGAAACCAGCAGGTCTTCAATCAACATATGAGATCCCCTCAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_378584.p2 GENE.R_Transcript_378584~~R_Transcript_378584.p2 ORF type:complete len:175 (+),score=10.32,zf-RVT|PF13966.2|3.1e-16,zf-RVT|PF13966.2|6.7e+03 R_Transcript_378584:2895-3419(+)
MLQKVVEAKEEMAMTAGVSTLNTRKIKDFYELMSNKTSKVPWYQMVWTSFAGPQTKIISWLLMNQKLATRDKITRWIPNCELICPLCNKDDESCEHLFIHCLFTKEVFARVWQGPCCTWTQVNSWQHLAEKCIQKSRGKTPKTKYLKASIVESCYHIWWERNQQVFNQHMRSPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST