Transcript Information: R_Transcript_378588.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.25172239116651
Condition 2: 8 Hour
Replicate 10.53815087796143
Replicate 20.24572397627677
Replicate 30.19946824857568
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_378588.p1 GENE.R_Transcript_378588~~R_Transcript_378588.p1 ORF type:complete len:91 (+),score=12.14,zf-RVT|PF13966.2|4.8e-06,zf-RVT|PF13966.2|1.1e+04 R_Transcript_378588:181-453(+)
ATGAGGATAGACTGTATTCTGTGCAATGAAAAAGAGGAAAATCATACCCACATTATGTTCGAATGTCATTTCACTAAGCAAGTTTGGGAGGAAAATCATGACAAGTTTAAGCTTGATAAGGTTGGGAGGATGAAGGTCAGAGATTGGAACACTGGAGTTAATTGGCTGGTATATAACAACAAGGGAAAAGGAGGAAGCAGAAGCCTGTTCAGAATGGTGAGTGCTGAAACCTGGTATAATATCTGGAGTGAGAGAAACAGAAGAATTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_378588.p1 GENE.R_Transcript_378588~~R_Transcript_378588.p1 ORF type:complete len:91 (+),score=12.14,zf-RVT|PF13966.2|4.8e-06,zf-RVT|PF13966.2|1.1e+04 R_Transcript_378588:181-453(+)
MRIDCILCNEKEENHTHIMFECHFTKQVWEENHDKFKLDKVGRMKVRDWNTGVNWLVYNNKGKGGSRSLFRMVSAETWYNIWSERNRRIF*

Click here to download the sequence:
Link to NCBI Protein BLAST