Transcript Information: R_Transcript_378591.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1798321276327
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.08941680108565
Condition 3: 24 Hour
Replicate 10.11309264644189
Replicate 20.10864659552009
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_378591.p1 GENE.R_Transcript_378591~~R_Transcript_378591.p1 ORF type:internal len:203 (+),score=38.00,zf-RVT|PF13966.2|1.3e-16 R_Transcript_378591:3-608(+)
TCTTTTACCATGAAGAAGGATAAAGTCTGGATTAAATGGCTGCATGGTTATTATCCAGGGCTTGATCAAACTAGGCCTGTTCATGGTCAACTATCATGGATGTTGAAAAAGATTCTTGAGAGAAAAGATGAGTTTGCTGCTATTTCTGCCAATCTCAAAAAGGATGCAAAAATCAGCAATATTTATGAGATTATGGTGGAGGATAGGCCAAAGGTAAAGTGGTATAACATGGTTTGGAAGAGCTTTGCTAGGCCTAGAGCAAAGTTTATTCTATGGCTGGCTATTCTACAAAGGTTAATGACAAAAGACAGAATTCAGAAATGGGATCCTACCTGCGATGTGCTGTGTCCTCTTTGTAAGATAGGACCAGAAAGCTGTGAGCACTTTTTTGTTCATTGTTCTTTCTGTCTGGAGGTAATTGCTGCTTTGATGAAAGGACTAAAAATCAATTGGAGCCCTGCTGGGAACTGGGATCAAGCATTAGCAGATTGGCAGAAGCTGTGCAAAGGAAAGCCCTCTAGAGCACAGTGTGCTAAAGCTATTCTAGCTAAGTTCAATTATGCAATTTGGTGGGAAAGAAACCAAAGAGTCTTTGGTCAGAGAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_378591.p1 GENE.R_Transcript_378591~~R_Transcript_378591.p1 ORF type:internal len:203 (+),score=38.00,zf-RVT|PF13966.2|1.3e-16 R_Transcript_378591:3-608(+)
SFTMKKDKVWIKWLHGYYPGLDQTRPVHGQLSWMLKKILERKDEFAAISANLKKDAKISNIYEIMVEDRPKVKWYNMVWKSFARPRAKFILWLAILQRLMTKDRIQKWDPTCDVLCPLCKIGPESCEHFFVHCSFCLEVIAALMKGLKINWSPAGNWDQALADWQKLCKGKPSRAQCAKAILAKFNYAIWWERNQRVFGQRN

Click here to download the sequence:
Link to NCBI Protein BLAST