Transcript Information: R_Transcript_37878.p1


Annotated TAIR IDAT1G63490.1
Annotated Gene Nametranscription factor jumonji (jmjC) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:23544938-23551946 | Reverse length=1116
E-Value1.6E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3845557607809
Replicate 25.7393486142237
Replicate 37.6748366753176
Condition 2: 8 Hour
Replicate 16.3155487138996
Replicate 27.7793642052454
Replicate 38.7258385244534
Condition 3: 24 Hour
Replicate 18.1247424036348
Replicate 26.4067975697564
Replicate 37.6147455894433


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37878.p1 GENE.R_Transcript_37878~~R_Transcript_37878.p1 ORF type:complete len:1167 (+),score=258.59,PLU-1|PF08429.7|1.2e-14,PLU-1|PF08429.7|2.3e-09,PLU-1|PF08429.7|1.1e-15,PLU-1|PF08429.7|2e+02,PLU-1|PF08429.7|0.0016,PHD|PF00628.25|8.2e+02,PHD|PF00628.25|1.8e-05,PHD|PF00628.25|1.3e-08 R_Transcript_37878:299-3799(+)
ATGACAGAGAAAGTTATTTCCGGCTGTAGTAACACTCCACGACGGAGGGGTTTGCCAAGGCAGAATTTGTGCTCCACAGACTCCGGTGCTTTGACGAAAAAGGTGAAGGGGAAACAATATACTCTTGCTCAGCTTGCTGAAGAGTGGCTCTTGAACTCATGTAAGATATTTCAGCTGCCTTTCTCCTCGAGTGCGTATGCTAATGCATTGAAGGAAGCACGTCAATTCCTCTGGGCAGGTCCGGAAATGGATCCGGTGAGGGATGTGTTTAAGAATTTGGTTCAAGCAAAGGAATGGGCAGAGAGCTTAAGACACTGTCTTTCAGTTGCTGAATGTTGGTCAAGTAGTGGTTCATTGGAGAAAATAAGCTTTGAACATATTGACAACTTGTTGAAACATGATCCTGTGCCATGCAATGAGCCAGGACATGCTAAATTGAAGGATTATGCTGAAGCAGCAAGGTTGTTGATTCAGGAAATTAATGATTTTCTGTCCAACTCTACATTTTCTATGGCCGAGTTGGAGAATTTGCATTCCCGAGCTTCCAACTTTCCAATCCAATGTAAAGAAAGCGAAAATTTGGCGAAAAAGATGTCATCTGTCAAGACGTGGCTTGATAACGTAAGAAAATGCGTTGTAGAGACTTGTCCAGCTGCAATTGAGATGGATTTCCTTTGCCATTTGAAATCAGAGATGTTGGAGCTTCAGTTACATGTGCCGGAGAATGAAATGCTTCTTGGGCTAATCAGGCAAGCTGAACTGTGCCAAGCTCAGTGTAATGAAATGCTGAAAGGTCCTATTACTCTGAAGGAACTTGAGTTGCTTATTAAGGAATTTGATGCTTTAGTAGTCAACGTTCCAGAGTTAAAACTACTACAACAATACCACAGTGATACTGTAATGTGGATCTCCCGTTTCAATAATTTACTATTGAATATTCATGAACGGGATGATCAGGAGAATGTCATGGATGAATTAAAATGCATCCAGAAAGATGGTTCATTATTAAGAGTTCAAGTTAATGAGTTGGCTCTCATTGAGGCTGAATTGAGCAAGGCATGCTGCAGAAAGGATGCACTGAAGGCACGTAGAATTAAAATGACTACAGACTTTGTCCAGAAAGTGCTGTCGGAGGCTGCTGTATTACAGATCGATGAGGAAGAATGCTTTGTTTGGCTTTCCAAAATGCTCACAACTGCCATGTCTTGGGAAGAAAGAGCTGTGCAGATTCTGGCAGTTGAGTCAAAGTTGGAGGACTTTGAGGATGCTATAAGGACCTCTGAGGACATATATTTGATCTTGCCTTCCCTTCCTGCTGTCAAGGATGCAGTATCAGCAGCAAAATCTTGGCTAGAAAGTTCAAAGTGTTTTCTAGAGCCTTCTTGTCTCACTGCATCTGCTTTGGCGTTTGAGGACTTGAGGGAGCAAGTTTCTCAGTCAAGGCTTCTTAAAATATCATTAGTGGAGCAAAGGATGGTTGAGACTCTTATGAGGAAATGTGAAGAGTGGAGATGCTGTGCTTGTTCTTCTCTAAGGGATGTAGAAGAAATGATGAATAGGAAAGATGTTTTTAATATGTCGACTAGTATTGTCATTTTGGACATTGATCAATTAAGAACCAAGGCTGATAATGTTGCTGCTGCTGGTATCTCCTTGGGGTTTGACTTTCCCGAACTCTCCAGTCTCCAAGATGCTTGTTCGACATTAAGTTGGTGCTCTAGGGTCCTTTCGTTTTGCTCAGAAATCCCTTCAGTTGAGGATGTTATCACTTTGATTGAAGTGATGAAAAACCTTCAAAGTGGGTATGCCAGTAGTTTTTTGTATACCTCCTTAATCAATGGAGTTTCCTGGCTGAAGAGGGCCACAGAAGTTCTACCTATGTCAAGACGACTGCATGTAACTGATGCTGAAGATATTCTGAAGGAATCCCAGAGTCTGGTGGTCTCGTTTTCTGCATCAATTACACAACTTCGGGAAGCAATTGAGAAACACAAGTCTTGGCAAGAAAAAGCACAAACTTTCTTCGGTGTTGATTCTAGTGAGCGCTCCTGGTCCGTTTTGTCGCTACTGAAGGAACTTGGAGAGAAGGTGTTCAATTGCCCAGAATTGGACATAGTGATGTCTGAGTTTGAGACTGTAGAAAACTGGAAGCAAAGAGGCAAGGAACTTGTTGGGTGTTCAGCTGGGGATGTGACTACTTTGTCAAGCTCCCTACTCAAGATCAAACAGTCATTGCATAGATCTTTGTATATATATGAGAAGTCCAAATGCTGGAAAGTGAGATATTTTTGCATTGGATGCTCCAGCAACACTGAGGATCAAGAGTTTATAACTTGTTCATCATGTAAGGACTGTTACCATCGTAGATGCTTGGTGCCGAAATCGTTTGACATTAGCAACGTGAGAGAATATAAGTGCCCATATTGTGCGTTAGTGGACAGCGGCTCAATCTCTCGGAGTAAAGACAGTCCTCTGAAATATAAAGGGAAGCGTCCTGAGCTGGAGAAGCTTGTTGATTTGTCTTCTGATGCTAAGAATTTTACCATAAGATTGGACGAGAAAGATATATTGTTAGAGATTGTTGATCAAGCTATTGCTTGTAGAGATTGCTTGTCAGAAATTGTTGATTCTTCATTATCCTTCTTTGAGAAAGATGTCTCATCCATCTCTAGGAAACTGACCATTGCTTTGAAGGCTCTAGATGTGGCAGGGGTGTATGATTCACATGCCAGCCACAGGTTTGATCTTGCACTGGCCAGAAATTCGTGGCGAATCAGAGCTAGTAAACTAGTTGAGGGTTCACAAAAGCCTGTAATCCAACAGGTGCAACGCCATTTGAAAGAGGGCTCGGCTATAAATGTGCCTTCACAAGATTTCTTCAAACAAAAGCTTGTAGAGGTGAAGCAGGCTGGAATGCAGTGGGCAGAGATGGCCAAGAAGGTTGCAGGTGATAAGGGAAATCTCGAGTTGGATAAAGTTTTTGCCCTCATTACAGAGGGTGAGAATTTGTCAGTCCACTTCGAGAAGGAGCTCAAGCTATTACGAGATCGAAGTGTGCTTTACTGTATTTGTCGAAAGCCTTATGATCAGAGACCGATGATTGCTTGCGATCAGTGTGATGAGTGGTACCATTTTGATTGTGTCAATTTGGTTTCACCGCCAAAGATCTACATTTGTCCTGCTTGTAATCCTCCAGTAGAAGGGAAGGCTCTTTTCTGTACGTCTGTTAAGCAAGACAGTCATTCGCGCAAATCTTCAAGTGTAAAAGACAGTGAACCACAAACACCTTCTCCTCGACATGGAAAATCACGTTGGAAGCCTCGGAAGCCAAAATCATGCACGAAGCAGAAGAAGTTGACAGTTGCAAACAGTAGCATTAGTTTGCTATTGCCTAGTGGTCTTGATCGATTGTTGTGGAGAAATAGGAAACCTTTGAAAAGATTGACAAAGAAAAGGACTGAGCTAGGAAACCTCACCGCATTAATTCATTTAGAGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37878.p1 GENE.R_Transcript_37878~~R_Transcript_37878.p1 ORF type:complete len:1167 (+),score=258.59,PLU-1|PF08429.7|1.2e-14,PLU-1|PF08429.7|2.3e-09,PLU-1|PF08429.7|1.1e-15,PLU-1|PF08429.7|2e+02,PLU-1|PF08429.7|0.0016,PHD|PF00628.25|8.2e+02,PHD|PF00628.25|1.8e-05,PHD|PF00628.25|1.3e-08 R_Transcript_37878:299-3799(+)
MTEKVISGCSNTPRRRGLPRQNLCSTDSGALTKKVKGKQYTLAQLAEEWLLNSCKIFQLPFSSSAYANALKEARQFLWAGPEMDPVRDVFKNLVQAKEWAESLRHCLSVAECWSSSGSLEKISFEHIDNLLKHDPVPCNEPGHAKLKDYAEAARLLIQEINDFLSNSTFSMAELENLHSRASNFPIQCKESENLAKKMSSVKTWLDNVRKCVVETCPAAIEMDFLCHLKSEMLELQLHVPENEMLLGLIRQAELCQAQCNEMLKGPITLKELELLIKEFDALVVNVPELKLLQQYHSDTVMWISRFNNLLLNIHERDDQENVMDELKCIQKDGSLLRVQVNELALIEAELSKACCRKDALKARRIKMTTDFVQKVLSEAAVLQIDEEECFVWLSKMLTTAMSWEERAVQILAVESKLEDFEDAIRTSEDIYLILPSLPAVKDAVSAAKSWLESSKCFLEPSCLTASALAFEDLREQVSQSRLLKISLVEQRMVETLMRKCEEWRCCACSSLRDVEEMMNRKDVFNMSTSIVILDIDQLRTKADNVAAAGISLGFDFPELSSLQDACSTLSWCSRVLSFCSEIPSVEDVITLIEVMKNLQSGYASSFLYTSLINGVSWLKRATEVLPMSRRLHVTDAEDILKESQSLVVSFSASITQLREAIEKHKSWQEKAQTFFGVDSSERSWSVLSLLKELGEKVFNCPELDIVMSEFETVENWKQRGKELVGCSAGDVTTLSSSLLKIKQSLHRSLYIYEKSKCWKVRYFCIGCSSNTEDQEFITCSSCKDCYHRRCLVPKSFDISNVREYKCPYCALVDSGSISRSKDSPLKYKGKRPELEKLVDLSSDAKNFTIRLDEKDILLEIVDQAIACRDCLSEIVDSSLSFFEKDVSSISRKLTIALKALDVAGVYDSHASHRFDLALARNSWRIRASKLVEGSQKPVIQQVQRHLKEGSAINVPSQDFFKQKLVEVKQAGMQWAEMAKKVAGDKGNLELDKVFALITEGENLSVHFEKELKLLRDRSVLYCICRKPYDQRPMIACDQCDEWYHFDCVNLVSPPKIYICPACNPPVEGKALFCTSVKQDSHSRKSSSVKDSEPQTPSPRHGKSRWKPRKPKSCTKQKKLTVANSSISLLLPSGLDRLLWRNRKPLKRLTKKRTELGNLTALIHLEQ*

Click here to download the sequence:
Link to NCBI Protein BLAST