Transcript Information: R_Transcript_378881.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0904366284637
Replicate 20.21814338094855
Replicate 30.65447821703293
Condition 2: 8 Hour
Replicate 10.63599649213624
Replicate 20.6969625508941
Replicate 30.37717632457947
Condition 3: 24 Hour
Replicate 10.8348293537347
Replicate 20.68743664074527
Replicate 30.85276771507392


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_378881.p1 GENE.R_Transcript_378881~~R_Transcript_378881.p1 ORF type:complete len:385 (+),score=46.58,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.8e-15,zf-RVT|PF13966.2|7.9e+03 R_Transcript_378881:249-1403(+)
ATGCAAGTCACACAGCTTCCTCAAACTGTAGTTGATCATCTTGAGAAATCCATGCGCCGTTTCCTGTGGAGTAAATCTAACTCCTCGCGTTTTATGGCCAGGGTTGGTTGGGATGTTATTTGTAAACCTCTAGCTATTGGGGGATTAGGGATTAGGCGTCTTAAGGACTGGAATTTAGCCTTCTTAGCTAAGCTATCATGGAGATTCTTAGCCGAGAAAAATAGACTCTGGGTTAAGGTTCTTAAGGCTCGTTACTTGAAAAGACAATCCTTCCTAAGTGCTATGCCTTCTTCCAACTCTTCTCATATCTGGAGGGTCATCCTTGCTGGTAAAGAAAAGCTCCTTGAGGGGCTGAAGGTGAGAATTGGTGATGGAATTGATACCTCCCTGTGGTACGACTGGTGGGTTGGGGAGAGACCACTTGTACAGTATATGCTTGGTGATGTTCCCTCCTCTATTGCCCATTGGCGCGTAGCGGATTTAATTGTGAATGGGTCCTGGAACTTGTCTAGGATCTCTCATCTCCTTCCCTATGATATTCTCCAAGCCATCCAATGTACTCCTCTCCCCCTCAGTCGGTCATGTCGAGACTCACTGAGATGGGGAATATCTGAACAAGGTACTATTTCTGTCAAATCTGTGTACAACCATCTCTCCACTTATGGGTTTGATTCCCCCTCTTCTGCTCCTTGGAAAAAAATCTGGAAGTTAAATATCCCAATGAAAATGCGTATGTTGATCTGGAGCTTGGTTCATAAAATTCTGCCCACTGCCGTCTTCCTTAGTGCTAGAATTCCAAATTTCAATCCTCAATGTCTCTCTTGCAACGACCCCACTGAAGATCTTCTTCATCTTTTTAGAGATTGCCCTATGGCCTCGCTGGTTTGGTCTTTCCTTCTTCAAGGTGATGCTTCTTTTGACTTTCACAGGTTCTTTCACTATGGTTGGGTGGAATGGCTCTCTTTCAACTTGAGCCTTGATAAGGACTGGTGCTCTAAATTTGCTATTATCTTATGGCATATCTGGTGTGCACGAAACAAGAGAATTTTTCAGGATATTACTATTGAACCCTCTTGGGTCTTCTCTTGCATTTGCCATGATTTTTCTCTTGTTTTTTCTTCTGAACAGATTGGCAAGCGCATGGTTACCTCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_378881.p1 GENE.R_Transcript_378881~~R_Transcript_378881.p1 ORF type:complete len:385 (+),score=46.58,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.8e-15,zf-RVT|PF13966.2|7.9e+03 R_Transcript_378881:249-1403(+)
MQVTQLPQTVVDHLEKSMRRFLWSKSNSSRFMARVGWDVICKPLAIGGLGIRRLKDWNLAFLAKLSWRFLAEKNRLWVKVLKARYLKRQSFLSAMPSSNSSHIWRVILAGKEKLLEGLKVRIGDGIDTSLWYDWWVGERPLVQYMLGDVPSSIAHWRVADLIVNGSWNLSRISHLLPYDILQAIQCTPLPLSRSCRDSLRWGISEQGTISVKSVYNHLSTYGFDSPSSAPWKKIWKLNIPMKMRMLIWSLVHKILPTAVFLSARIPNFNPQCLSCNDPTEDLLHLFRDCPMASLVWSFLLQGDASFDFHRFFHYGWVEWLSFNLSLDKDWCSKFAIILWHIWCARNKRIFQDITIEPSWVFSCICHDFSLVFSSEQIGKRMVTS*

Click here to download the sequence:
Link to NCBI Protein BLAST