Transcript Information: R_Transcript_378898.p1


Annotated TAIR IDAT1G09690.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:3136407-3137430 | Reverse length=164
E-Value9E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.67603559091551
Replicate 20.31105630246367
Replicate 30.50903861324783
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_378898.p1 GENE.R_Transcript_378898~~R_Transcript_378898.p1 ORF type:5prime_partial len:135 (+),score=19.45,Ribosomal_L21e|PF01157.14|1.1e-28,Ribosomal_L21e|PF01157.14|5.9e+03 R_Transcript_378898:2-406(+)
ACCACTGTCCTCTTGAGAAACTACAAGAGAGGAGACTATGTTGATATTAAGGTTGATTCCTCTGTCCACAAGGGTATGCCATTCAAGCACTACCACGGCAGAACTGGTATTGTCTTCAATGTGAATAAGCGCGCTGTTGGTGTCGTTGTTAACAAGTCTGTTAACGGCAGAATCATCCCAAAGAAGATCCACGTCGCTGTCCCTCACGTCCGCCCATCTACTTGCCAAGCACAAATCATTGCCCGCAAGAAGCAAAACGAAGAGACCAAGAAGGCTGTCCGAGAAGGAAAGCAAGAGAGACAAAACTTGAAGCGTCAGAACGCTCAACCAAAGACTGGATACTTCTATCAACTCGCTGCCACCCCAGAGACCATCCAACCATTACCATATGTTGACTTGGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_378898.p1 GENE.R_Transcript_378898~~R_Transcript_378898.p1 ORF type:5prime_partial len:135 (+),score=19.45,Ribosomal_L21e|PF01157.14|1.1e-28,Ribosomal_L21e|PF01157.14|5.9e+03 R_Transcript_378898:2-406(+)
TTVLLRNYKRGDYVDIKVDSSVHKGMPFKHYHGRTGIVFNVNKRAVGVVVNKSVNGRIIPKKIHVAVPHVRPSTCQAQIIARKKQNEETKKAVREGKQERQNLKRQNAQPKTGYFYQLAATPETIQPLPYVDLV*

Click here to download the sequence:
Link to NCBI Protein BLAST