Transcript Information: R_Transcript_378936.p1


Annotated TAIR IDAT4G06634.1
Annotated Gene Namezinc finger (C2H2 type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:3764499-3766439 | Reverse length=387
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39113487760112
Replicate 20.37493393600532
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.079860292289949
Replicate 30.064827180787096
Condition 3: 24 Hour
Replicate 10.081992168670372
Replicate 20.86645659927268
Replicate 30.078170373881776


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_378936.p1 GENE.R_Transcript_378936~~R_Transcript_378936.p1 ORF type:5prime_partial len:280 (+),score=37.41,zf-C2H2|PF00096.22|0.0011,zf-C2H2|PF00096.22|7.4e-06,zf-C2H2|PF00096.22|0.0023,zf-C2H2|PF00096.22|0.013,zf-C2H2_4|PF13894.2|0.044,zf-C2H2_4|PF13894.2|0.036,zf-C2H2_4|PF13894.2|0.003,zf-C2H2_4|PF13894.2|0.012,zf-H2C2_2|PF13465.2|1.4,zf-H2C2_2|PF13465.2|0.0017,zf-H2C2_2|PF13465.2|0.011,zf-H2C2_2|PF13465.2|0.00043,zf-H2C2_2|PF13465.2|2.1e+03,zf-C2H2_aberr|PF17017.1|4.8,zf-C2H2_aberr|PF17017.1|0.09,zf-C2H2_aberr|PF17017.1|0.2,zf-C2H2_aberr|PF17017.1|0.033 R_Transcript_378936:3-842(+)
TCATTCTTTCTTTCTTTCGATCCCATGCAAGACAACTTCGATTTCCTCATTGACTTCAACAACATCACCTACTCTCCCCTTCCTGAGACTCTTGAAAAAGAATCATCTCAAGAAGCCGAGTATGTTGAGATATTCCAGAATGGCAAGAAGAGCTTCCAGTGCACTTATCAAGGCTGCGGAAAGACCTTCAGATACAAGTCTGAAGCCAACAGACACCTTATCATCCACCAAAAGGACAAGAACTATCGTTGCACTGTCAGTGGCTGCAACAAGGCTTTCAAGAGACAAGAGACCCTTGAAGACCATATGAAGTTACACGAAGGTGACTTACCTTTCTCATGTGACGAACACGGATGTGGCAGAAAATTCGCATCCAAGCCAGCCTTGAGATATCACATGCTCAGACACCAGAACAACCGTGAGTTCAGATGCGATATCGAAGGATGTGGCAAAACTTTCCTGACTATGTCTCATCTTAGACAACATCAGATGTCCGGTTTACATTCTGAACAATCTGTGTCAGATGTGTCTGAGAGCAAGCCCTACAAGCTCCGTAAGAGCGAGTTCGAGACCGACGTTTCAACCAGTTCAGAGGACAATATTAAAGAAATGTCTGAACTCCTTCAAAGCACCCTTGCTGAGAACAGATTGTTGAAACAAAGACTCGAAACTCAAGAAAGCCAAGAAAGCCCTTTGTTTTCTGAACAAGAGAGTCAATCAAGCTTCCCATGTGCCAGTCCAATTTCTTTTTCAGATATTGTTGAGCCCAGCTTGTTTTTCGATAAGTATGAATTGGACATTCTGGAATTCTTAAATGAGAATGACAAAACTGACTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_378936.p1 GENE.R_Transcript_378936~~R_Transcript_378936.p1 ORF type:5prime_partial len:280 (+),score=37.41,zf-C2H2|PF00096.22|0.0011,zf-C2H2|PF00096.22|7.4e-06,zf-C2H2|PF00096.22|0.0023,zf-C2H2|PF00096.22|0.013,zf-C2H2_4|PF13894.2|0.044,zf-C2H2_4|PF13894.2|0.036,zf-C2H2_4|PF13894.2|0.003,zf-C2H2_4|PF13894.2|0.012,zf-H2C2_2|PF13465.2|1.4,zf-H2C2_2|PF13465.2|0.0017,zf-H2C2_2|PF13465.2|0.011,zf-H2C2_2|PF13465.2|0.00043,zf-H2C2_2|PF13465.2|2.1e+03,zf-C2H2_aberr|PF17017.1|4.8,zf-C2H2_aberr|PF17017.1|0.09,zf-C2H2_aberr|PF17017.1|0.2,zf-C2H2_aberr|PF17017.1|0.033 R_Transcript_378936:3-842(+)
SFFLSFDPMQDNFDFLIDFNNITYSPLPETLEKESSQEAEYVEIFQNGKKSFQCTYQGCGKTFRYKSEANRHLIIHQKDKNYRCTVSGCNKAFKRQETLEDHMKLHEGDLPFSCDEHGCGRKFASKPALRYHMLRHQNNREFRCDIEGCGKTFLTMSHLRQHQMSGLHSEQSVSDVSESKPYKLRKSEFETDVSTSSEDNIKEMSELLQSTLAENRLLKQRLETQESQESPLFSEQESQSSFPCASPISFSDIVEPSLFFDKYELDILEFLNENDKTDF*

Click here to download the sequence:
Link to NCBI Protein BLAST