Transcript Information: R_Transcript_379227.p1


Annotated TAIR IDAT5G11100.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTD, ATSYTD, NTMC2TYPE2.2, NTMC2T2.2, SYT4
Annotation TypeHomolog
Chromosome Positionchr5:3532402-3535221 | Forward length=569
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.76532331047039
Replicate 20.17606960516812
Replicate 30
Condition 2: 8 Hour
Replicate 10.46199745183481
Replicate 20.18751263598478
Replicate 30.07610738205613
Condition 3: 24 Hour
Replicate 10
Replicate 20.046237440022175
Replicate 30.045886173347793


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379227.p1 GENE.R_Transcript_379227~~R_Transcript_379227.p1 ORF type:internal len:477 (+),score=88.52,C2|PF00168.26|8.3e-05,C2|PF00168.26|2.7e-19 R_Transcript_379227:2-1429(+)
AACAATCAAGAAGTTTCCTCATTCGTAAGTAGAGTAGAAACTAAGAGGATCATTGAAACTGCTACTGCGGTAGTCCCTGGAATGATGAGCCTAGGTTACAATTCTACAACAGAGGTACAGGCTGCAGAGGAGATCAACGAAGTAATTTTTGGAGATGTAGAACTGGAGTCCAAAGAATCTGAGGAAAAGATCAAGAAAGTAGGATCATCAATTGGAAGAAGTGCTATTTCAAGACTTTTCTACGCTCTTACTATTGTCAAGCAAAGATTATTACAGTTGAATTTAAAGGGCTCTGTGGAGGCTGATGTTAATCTTGCAATGTTTCACTACAGTATGATGGTAGAGTTTAATTCTGATATCAACTCTGTAGAGACAGAGACCAATCAGATACAGGAGATGGAGAAAACAGTGGCTGAGAATGATGAGATCAAAGACAAGGAAACCATCAAAAACGTCAAACAAGCAAAGTTTTCTTTCATCAAGAAGGCAATTGCAAAAGTGATGGTATCATTCAGAGATCACATGATCTTAATGGCAGACAAACTAGGAACTAAAAACATACCTATTGGTAACTTTGCTTTTGGTTTTGTTATACCTCTGGGTCCTCTTGGTAGTATTTCTATCAAATGCAGGGTTTTGCTTCAAGCTTTAGTTCATTTTAGTAACTTGCAGAAGAACTTGGTGAAACAACGCCAGTATGGAAGTTTGATCATCCGATTGATCTCTGGTACAGCTCTAAAGAAAGATAACTCCTCAGTCTCCTTTAGAATTGGAGAAGAAAAGAAAGAAAGCAGCTTAAAATATACTTTCACTCCAAACTGGAATGAAACATTTGATGCTTTTCCTTGTGCATCTGCAGGAGATGAGATTTGCATTAAATTACTACACAAGAACAAGAACATTGGGAAGAAGCTAATAGAAGAGATCTTTATCAATGTCGACAAAATGAAATTTGAGAATAACGTACCTAAACTTGTAGACCTTCCTTTGTTATCAGGAGGCTCTCTTCAAGTAGAATTTACTTTTAAAAAGATTGATCCAAATGTTTTTGATGGATACCTGAAAGTTGAGGCTGTAGAAGGAAAGAAACTTGCAAAGAAGGATTTCTCAGGAAAGAGTGATCCATACCTCATTTTCTTCCCTGGAAGACTTATTGCGAACAGGATAAATCCAACCTCAGAGTCTCTTGTCAAGACCAAGTACATCAAACAAAGCCTCAACCCAGTTTGGAACGAAACAATAACAATGAAGATACCTGCACTAAATGAAGGCTTCACCATCTTCTGTTATGATTATGACATGACTGGAGATCATGACTTCATGGGAAAGGTGTTTGTTCCTTTGGACAATATCAAGCCAGGTACTCAATATGATAAGTGGTTCGAATTTGAACGCCCTCAAGGTGGAAAGATCAGAATCAAATACCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379227.p1 GENE.R_Transcript_379227~~R_Transcript_379227.p1 ORF type:internal len:477 (+),score=88.52,C2|PF00168.26|8.3e-05,C2|PF00168.26|2.7e-19 R_Transcript_379227:2-1429(+)
NNQEVSSFVSRVETKRIIETATAVVPGMMSLGYNSTTEVQAAEEINEVIFGDVELESKESEEKIKKVGSSIGRSAISRLFYALTIVKQRLLQLNLKGSVEADVNLAMFHYSMMVEFNSDINSVETETNQIQEMEKTVAENDEIKDKETIKNVKQAKFSFIKKAIAKVMVSFRDHMILMADKLGTKNIPIGNFAFGFVIPLGPLGSISIKCRVLLQALVHFSNLQKNLVKQRQYGSLIIRLISGTALKKDNSSVSFRIGEEKKESSLKYTFTPNWNETFDAFPCASAGDEICIKLLHKNKNIGKKLIEEIFINVDKMKFENNVPKLVDLPLLSGGSLQVEFTFKKIDPNVFDGYLKVEAVEGKKLAKKDFSGKSDPYLIFFPGRLIANRINPTSESLVKTKYIKQSLNPVWNETITMKIPALNEGFTIFCYDYDMTGDHDFMGKVFVPLDNIKPGTQYDKWFEFERPQGGKIRIKYQ

Click here to download the sequence:
Link to NCBI Protein BLAST