Transcript Information: R_Transcript_379231.p1


Annotated TAIR IDAT2G05100.1
Annotated Gene Namephotosystem II light harvesting complex gene 2.1
Annotated Gene Symbol(s)LHCB2.1, LHCB2
Annotation TypeOrtholog
Chromosome Positionchr2:1823449-1824331 | Reverse length=265
E-Value3.5E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1388057867279
Replicate 20
Replicate 30.17419572316466
Condition 2: 8 Hour
Replicate 10
Replicate 20.76520127973639
Replicate 30.069017530875996
Condition 3: 24 Hour
Replicate 10
Replicate 20.083860299964172
Replicate 30.083223211737252


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379231.p1 GENE.R_Transcript_379231~~R_Transcript_379231.p1 ORF type:3prime_partial len:263 (+),score=56.21,Chloroa_b-bind|PF00504.17|4.1e-50 R_Transcript_379231:31-786(+)
ATGGCCACCTCTGCTATTCAGCAATCAGCATTCGCAGGTCAAACTGCTCTGAAGCAGCTCAATGAGTTGGTCCGCAAGACCGGTGGCGCCGGCAAAGGTCGCACTAACATGCGCCGCACCGTCAAGAGTGCTCCTCAGAGCATTTGGTATGGCCCTGACCGTCCCAAGTACTTGGGTCCATTCTCGGAGCAGATTCCATCATACCTGACCGGAGAATTCCCTGGTGACTACGGATGGGACACTGCTGGATTATCAGCTGACCCGGAAACCTTCGCCAGGAACCGGGAGCTGGAGGTGATTCACAGCAGATGGGCAATGCTTGGTGCCCTTGGCTGCACCTTCCCAGAGATCCTTGAGAAGAATGGTGTGAAATTCGGCGAGGCCGTGTGGTTCAAGGCTGGTTCACAGATCTTCTCGGAGGGAGGACTTGACTACTTGGGCAACCCAAACCTGATCCATGCTCAAAGCATCCTTGCCATCTGGGCTGTTCAGGTTGTGCTCATGGGTTTTGTTGAAGGTTACAGAGTTGGTGGAGGACCCCTTGGTGAAGGACTTGACCCTATCTACCCTGGTGGTGCATTTGACCCTCTTGGTCTGGCTGATGACCCTGATGCATTCGCTGAGTTGAAGGTCAAGGAACTCAAGAACGGTCGCTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTTCAGGCTATTGTCACTGGCAAGGGCCCTATTCAGAACCTTTACGACCACGTTGCTGATCCTGTTGCCAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379231.p1 GENE.R_Transcript_379231~~R_Transcript_379231.p1 ORF type:3prime_partial len:263 (+),score=56.21,Chloroa_b-bind|PF00504.17|4.1e-50 R_Transcript_379231:31-786(+)
MATSAIQQSAFAGQTALKQLNELVRKTGGAGKGRTNMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVAN

Click here to download the sequence:
Link to NCBI Protein BLAST