Transcript Information: R_Transcript_379291.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value5E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24017053887788
Replicate 20.27626711074076
Replicate 30
Condition 2: 8 Hour
Replicate 10.32218243351638
Replicate 20.44133319423393
Replicate 30
Condition 3: 24 Hour
Replicate 10.45311461633626
Replicate 20.58040154975203
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379291.p1 GENE.R_Transcript_379291~~R_Transcript_379291.p1 ORF type:5prime_partial len:152 (+),score=22.09,zf-RVT|PF13966.2|1.5e-12,zf-RVT|PF13966.2|1.6e+04 R_Transcript_379291:2-457(+)
AAACATCAGATAATAACTTGGCTAGCTATGAAGAGGGCCCTGCCTACTGTTGATCTCCTTGTAACTAGGGGGATGATGATAGTTAACAGATGTGAACTATGTCTGTTAGATGCTGAATCTCATGAGCATCTTTTCTTTCGATGTGCTTACACTAATACTGTATGGAGGAACATTGCTAAGTGGGTTGGAATTAGCAGAAAAGAAGGAAGTTTATGGAAGGAATTGAGATGGCTCTCGAGAAATAATAGAGGGAAGGCTTGGCAAAAAAGATGGAGAAGGGCAGCTATATGTGCAACAGTTTATGAGGTTTGGCAGGAGAGAAACCTTCGCCTGTTTGCTGAACATAGAAGATCAGTTGGCCAGGTTGTTCACAGGATACAGTTTTTGGTTGCCTGTAGACTTCTGTGGATATGTGAAGGGGAGAGCATGGCTATTGGCAGTAGTCTTCTTGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379291.p1 GENE.R_Transcript_379291~~R_Transcript_379291.p1 ORF type:5prime_partial len:152 (+),score=22.09,zf-RVT|PF13966.2|1.5e-12,zf-RVT|PF13966.2|1.6e+04 R_Transcript_379291:2-457(+)
KHQIITWLAMKRALPTVDLLVTRGMMIVNRCELCLLDAESHEHLFFRCAYTNTVWRNIAKWVGISRKEGSLWKELRWLSRNNRGKAWQKRWRRAAICATVYEVWQERNLRLFAEHRRSVGQVVHRIQFLVACRLLWICEGESMAIGSSLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST