Transcript Information: R_Transcript_379538.p1


Annotated TAIR IDAT1G53500.1
Annotated Gene NameNAD-dependent epimerase/dehydratase family protein
Annotated Gene Symbol(s)MUM4, RHM2, ATRHM2, ATMUM4
Annotation TypeHomolog
Chromosome Positionchr1:19967157-19969239 | Reverse length=667
E-Value9E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94497618021705
Replicate 20.11442125567465
Replicate 30.6241617873611
Condition 2: 8 Hour
Replicate 10
Replicate 20.12185766670946
Replicate 30.098918858966687
Condition 3: 24 Hour
Replicate 10.18766599913655
Replicate 20.48076858617062
Replicate 30.35783713384573


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379538.p1 GENE.R_Transcript_379538~~R_Transcript_379538.p1 ORF type:5prime_partial len:367 (+),score=43.96,Epimerase|PF01370.17|1.5e-24,GDP_Man_Dehyd|PF16363.1|1e-14,RmlD_sub_bind|PF04321.13|2.4e-08,RmlD_sub_bind|PF04321.13|1.2e+03,3Beta_HSD|PF01073.15|2.2e-08 R_Transcript_379538:1-1101(+)
GTGAAAATGGTGAAACCAAACGTATTAGTTCTTGGAGGTGTTGGATTCATTGGTAGAAATCTTGTAACCCATCTTGTAAACAATGACCTCGCTGGTTATATTCGAGTTGCCGATAAGGTTTTACCAACTACTGCTTATTTAGGATCTCCACACGCAGAAGCATTCGCAAACCCAATCGTGGAATTTAAACAATGCAATCTTGCAAATGAAGCTGGTATCAACAGAGCTTACGAACTCCCCGATGGAGGAAAATTTGACTTCGTTTTCAACCTTGCAGCTGAAACTAAATACGGACAAACTGATGAAGTTTATGCAGAAAAAATTCTGACTTTGTCTACTAAACTTGGTGAAGCTGCTGTACGATTTGGAGCTGGTAAATTTGTTGAAGCATCTACTGCTCAAGTTTACTCTGAAGGAAAGAAACCAAGTAAAGAAGATGCCAAACTTGAACCATGGACTGGTATTGGTAAATACAAACTTCAAGCCGAAAATGCCTTAAAACAAATCAACGGTCTCCCCCTTATTATTGTCAGACCCGCTACCGTTTACGGACCTGGTGATGTTTCAGGAATTTCCCCCCGAATTATTTGCGGAGCTGTTTACAAATATTTGGGAGAAAAAATGAAGCTTCTCTGGAGCGGTGACCTCAGAATCTCTACCGTTCATGTTCGTGACGTTTGTGTTGCTTTATGGCACTTGGCTAACAATGCTCAAACTGGAACTACTTGGAATTTGGCTGATAAAAATGATACCAACCAAGAAAAAATCAACACCTTTATTTCCTCTATCTTCGGTATCAAAACTGGATTTTATGGAAACATGCTCTCCAATGTTGCCAAGATGAAGTTAAAGGATGTTACCGAGGAAATTAATGATAAACATCTTAAACCATGGTCTGACTTATGTAAGGCCACTAATATCACCAATACTCCTTTAACTCCTTACATTGATCAAGAACTCTTGTATAACTATGCTTTTTCAATTGACGGATCTGCAATTGAATCAACTGGCTTCAGATACTCTCACCCAACAATGACTGAGGATTTAGTTCGAGAACAACTTCAATACTTCGTTTCTCAAAACCTCTTCCCCCCTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379538.p1 GENE.R_Transcript_379538~~R_Transcript_379538.p1 ORF type:5prime_partial len:367 (+),score=43.96,Epimerase|PF01370.17|1.5e-24,GDP_Man_Dehyd|PF16363.1|1e-14,RmlD_sub_bind|PF04321.13|2.4e-08,RmlD_sub_bind|PF04321.13|1.2e+03,3Beta_HSD|PF01073.15|2.2e-08 R_Transcript_379538:1-1101(+)
VKMVKPNVLVLGGVGFIGRNLVTHLVNNDLAGYIRVADKVLPTTAYLGSPHAEAFANPIVEFKQCNLANEAGINRAYELPDGGKFDFVFNLAAETKYGQTDEVYAEKILTLSTKLGEAAVRFGAGKFVEASTAQVYSEGKKPSKEDAKLEPWTGIGKYKLQAENALKQINGLPLIIVRPATVYGPGDVSGISPRIICGAVYKYLGEKMKLLWSGDLRISTVHVRDVCVALWHLANNAQTGTTWNLADKNDTNQEKINTFISSIFGIKTGFYGNMLSNVAKMKLKDVTEEINDKHLKPWSDLCKATNITNTPLTPYIDQELLYNYAFSIDGSAIESTGFRYSHPTMTEDLVREQLQYFVSQNLFPPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST