Transcript Information: R_Transcript_379563.p1


Annotated TAIR IDAT4G38140.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17899868-17900305 | Reverse length=145
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.091707359352978
Replicate 20
Replicate 30.20395068112794
Condition 3: 24 Hour
Replicate 10
Replicate 20.16520793176462
Replicate 30.16395284409661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379563.p1 GENE.R_Transcript_379563~~R_Transcript_379563.p1 ORF type:complete len:267 (-),score=63.84,zf-RING_2|PF13639.2|7.4e-11,zf-rbx1|PF12678.3|8.8e-07,zf-RING_11|PF17123.1|4.7e-06,zf-C3HC4|PF00097.21|6.6e-06,zf-C3HC4_2|PF13923.2|1.5e-05 R_Transcript_379563:65-865(-)
ATGGATCCAACCTCAGTTATTGAGCATGATGATCCCCTGCTGCTGTATGCACATTATTCAGTTCTAGGGTTCACAATCCAATGTTGGGCTATTGACCCTATCCCAACTGATCAACATCAGAGTCCAGTTGATGATGAATTTGTAGTCAACTTAGTTTATAACAAGTTTGGTACTTCAAGGGACTTGATCTTCAAGATGATGTACATGGAGGAGGAGTATTGCAGGGGGAATGTGGTTGAGTGGGTTGAGAAACTTGGAGTTGAAGAAACTGTGTTTGAGCCCACCGTCAAAGCCGTTCTATGTGGGATTGAAACCTTGACATATCAAGTTCAACATCTGGGCCGAAAGTCGCTCGCTATGATGGTCGAGATCAACTTCTTTGAGCCTACTTCTGTTGTTCCTGACCCCAACTTGGTCCAGGAGGCTAACATTAATGTTAGCGACGAGGACGAGGAAGATGAGCCAACTTATGAGGAGGAGGAAGAAGAAGAAGACGAAGAGGGCAACGAGGTTGTAGAGGAGCAATATAGAATGGCAAAGGGGATGTTGGAAGCAAGTGGGGTGAGATTTGATGAAGTTAGTTCGGTGTCTAATAATAAAGTTGTGAAAATTGGATGTTGTCCAATTTGCTTGGATGAGTTTGGGATGGAAGATGATGATCAAGTACAGGTAGCTGTAATGCCAGCTTGCTCTCATGTCCTCCACTTGGATTGTCTTCTTCCTTGGATCGTTAATGGTGGTTCCAATTGTCCCTTGTGTAGGTCACAAATACTTTCACCTGTTTTCATGGAGGAGTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379563.p1 GENE.R_Transcript_379563~~R_Transcript_379563.p1 ORF type:complete len:267 (-),score=63.84,zf-RING_2|PF13639.2|7.4e-11,zf-rbx1|PF12678.3|8.8e-07,zf-RING_11|PF17123.1|4.7e-06,zf-C3HC4|PF00097.21|6.6e-06,zf-C3HC4_2|PF13923.2|1.5e-05 R_Transcript_379563:65-865(-)
MDPTSVIEHDDPLLLYAHYSVLGFTIQCWAIDPIPTDQHQSPVDDEFVVNLVYNKFGTSRDLIFKMMYMEEEYCRGNVVEWVEKLGVEETVFEPTVKAVLCGIETLTYQVQHLGRKSLAMMVEINFFEPTSVVPDPNLVQEANINVSDEDEEDEPTYEEEEEEEDEEGNEVVEEQYRMAKGMLEASGVRFDEVSSVSNNKVVKIGCCPICLDEFGMEDDDQVQVAVMPACSHVLHLDCLLPWIVNGGSNCPLCRSQILSPVFMEEC*

Click here to download the sequence:
Link to NCBI Protein BLAST