Transcript Information: R_Transcript_379650.p1


Annotated TAIR IDAT5G61820.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Stress up-regulated Nod 19 (InterPro:IPR011692); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24834505-24836223 | Reverse length=475
E-Value6.1E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55034053129805
Replicate 20.63305428390848
Replicate 30.34532770245456
Condition 2: 8 Hour
Replicate 12.3378464019983
Replicate 22.8091560101992
Replicate 33.557350825101
Condition 3: 24 Hour
Replicate 10.57682932732925
Replicate 20.66498268011791
Replicate 30.98989619186973


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379650.p1 GENE.R_Transcript_379650~~R_Transcript_379650.p1 ORF type:internal len:199 (-),score=24.04,SURNod19|PF07712.8|2.4e-86 R_Transcript_379650:3-596(-)
CAATTGCATAAGGATCCGGTACATATGTGGCAGTTTTTCGGGTTTCAGATCCCAATCCAAAATACTGCCACATATGTACCGGATCCTTATGCAATTGAAGTTGGGAATTCAGACGAAGTACCACCAGGGTATGAGGAGAGATGGCTTCTTAATGTTCATGCGATTGATACTCGAGGTGTGGTGGATAGGTTGGGATGCACAGAGTGCAGGTGTGATCTCTACAATGTTACTGTCGATGAATATGGCAGACCCTTGAGCCCTGATTATGAAGGTGGCCTGTATTGTTGCTACGATCAAACACAATGCAAGTTGAACGAAGGTTCTGGACATTCACCTAGGAAGTTGTACTTAAGATACACTGTGAAGTGGTATGATTGGGATGAATCTATTCTCCCTGTCAAGATATATATCTTTGATATAACTGATACCGGGAAGACATCCGAGACCTCCACAGCATCTAATGCAAATCATCACTGCAAGATTGAGTATGAAATTGAGGCTTGCGAATCATCTGCTACGTCTGTTGATGGGTGCACTGACTCCAAGAGGATGACCTTTGTGATGCCAAGAGGCGGCTATGTGATTTATGGTGTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379650.p1 GENE.R_Transcript_379650~~R_Transcript_379650.p1 ORF type:internal len:199 (-),score=24.04,SURNod19|PF07712.8|2.4e-86 R_Transcript_379650:3-596(-)
QLHKDPVHMWQFFGFQIPIQNTATYVPDPYAIEVGNSDEVPPGYEERWLLNVHAIDTRGVVDRLGCTECRCDLYNVTVDEYGRPLSPDYEGGLYCCYDQTQCKLNEGSGHSPRKLYLRYTVKWYDWDESILPVKIYIFDITDTGKTSETSTASNANHHCKIEYEIEACESSATSVDGCTDSKRMTFVMPRGGYVIYGV

Click here to download the sequence:
Link to NCBI Protein BLAST