Transcript Information: R_Transcript_37970.p1


Annotated TAIR IDAT1G76160.1
Annotated Gene NameSKU5 similar 5
Annotated Gene Symbol(s)sks5
Annotation TypeOrtholog
Chromosome Positionchr1:28578211-28581020 | Reverse length=541
E-Value4.4E-280
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.540673583937
Replicate 210.160860241622
Replicate 312.511310494284
Condition 2: 8 Hour
Replicate 19.4403334736367
Replicate 211.584553243024
Replicate 316.329159754886
Condition 3: 24 Hour
Replicate 117.471905500602
Replicate 215.766409969971
Replicate 318.151851477286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_37970.p1 GENE.R_Transcript_37970~~R_Transcript_37970.p1 ORF type:complete len:498 (+),score=81.09,Cu-oxidase|PF00394.18|3e+03,Cu-oxidase|PF00394.18|36,Cu-oxidase|PF00394.18|2.4e-38,Cu-oxidase|PF00394.18|78,Cu-oxidase_3|PF07732.11|1.4e-37,Cu-oxidase_3|PF07732.11|5.1e+03,Cu-oxidase_2|PF07731.10|2.3e+02,Cu-oxidase_2|PF07731.10|72,Cu-oxidase_2|PF07731.10|1.5e-23 R_Transcript_37970:144-1637(+)
ATGGGGGAGAAGTATTTGTTCTTCTTTGTAATAATACTAGTGAGCAGCAGCTGTAAAGGGGAGAGCCCTTACAGATTCTACACTTGGAATGTTACTTATGGTGATATTTATCCTCTTGGTGCCAAGCAACAGGGGATATTGATAAATGGGCAATTTCCAGGACCTCCAATTGAGGCTGTTACTAATGACAATTTGGTCATCAGTGTTTTCAATGGCTTGGATGAACCTTTCCTCCTTTCCTGGAATGGAATACAGCAGAGAAAGAACTCATGGCAAGATGGTGTATATGGCACCAACTGCCCCATCCCACCAGGACAAAACTTCACATACATTCTCCAAGCTAAAGATCAGATTGGCAGTTACTTCTACTTCCCTTCTCTTGCCTTCCACAAGGCTGCAGGAGGTTATGGTGGCATCAAACTCGACAGTCGCCCCTTGATCCCCGTACCATTCCCTCCCCCTGCTGGAGATTTTACTGTTCTTGCTGGAGACTGGTTTAAGATGAATCACACTGATTTAAAGGCTATCTTGGACAATGGAAGTGATTTGCCTTTCCCTGACGGGCTGCTCATCAATGGTCGTGGATCAAATGGAATCACATTCACAGTTGAACAAGGCAAGACGTACAGATTCAGGATATCGAATGTTGGGATAGGAACAACGATCAATTTCAGAATCCAAGGGCACAACTTGCTGTTGGTGGAGACAGAAGGTGACCACACACTACAGAACACTTATTCCTCCCTCGACGTTCATTTGGGACAATCCTATTCAGTACTTGTGACAGCTGATCAAGCTCCTCAAGATTACTACATCGTTGTCTCTACTCGTTTCACCTCTCAAGTACTCACCTCCACCGCTACTCTCCACTATAGTAACTCAGCCGGAGGTGTTTCTGGCCCTTCCCCTGGGGGCCCCACAACAGAGGTTGACTGGTCTATTAACCAGGCTAGATCCATCAGGCAGAACCTGACTGCTAGTGGGCCAAGGCCAAATCCACAAGGTTCCTATCATTATGGGTTGATCAACACCACTCGTACAATCAGATTAGCAAATTCAGCTCCAGTGATCAATGGGAAGCAGAGGTACGCTGTAAACAGCGTGTCCTTCATCCCAGCAGATACGCCCTTGAAGCTTGCAGATTACTTCAACATTCCTGGTGTGTTCACCCTTGGAAGCATCCCAGACAACCCCAATGGTGCTGGCGCTTTTCTCCAGACGTCTGTCATGGAAGCTGACTATCGAGCTTATGTGGAGGTTGTGTTTGAGAACCCTGAAGACACCATCCAGTCTTGGCACATCGATGGCCAAATATTCTTCGTTGTTGGAATGGACGGAGGACAATGGTCACCTGACAGCAGATCAAGTTACAATCTAAGAGACACAATTTCTAGATCAACTGTTCAGGTCTATCCTAATTCATGGACAGCAGTTTATATGCCACTGGATAATGTGGGAATGTGGAATGTAAGATCACAAAACTGGGCGCGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_37970.p1 GENE.R_Transcript_37970~~R_Transcript_37970.p1 ORF type:complete len:498 (+),score=81.09,Cu-oxidase|PF00394.18|3e+03,Cu-oxidase|PF00394.18|36,Cu-oxidase|PF00394.18|2.4e-38,Cu-oxidase|PF00394.18|78,Cu-oxidase_3|PF07732.11|1.4e-37,Cu-oxidase_3|PF07732.11|5.1e+03,Cu-oxidase_2|PF07731.10|2.3e+02,Cu-oxidase_2|PF07731.10|72,Cu-oxidase_2|PF07731.10|1.5e-23 R_Transcript_37970:144-1637(+)
MGEKYLFFFVIILVSSSCKGESPYRFYTWNVTYGDIYPLGAKQQGILINGQFPGPPIEAVTNDNLVISVFNGLDEPFLLSWNGIQQRKNSWQDGVYGTNCPIPPGQNFTYILQAKDQIGSYFYFPSLAFHKAAGGYGGIKLDSRPLIPVPFPPPAGDFTVLAGDWFKMNHTDLKAILDNGSDLPFPDGLLINGRGSNGITFTVEQGKTYRFRISNVGIGTTINFRIQGHNLLLVETEGDHTLQNTYSSLDVHLGQSYSVLVTADQAPQDYYIVVSTRFTSQVLTSTATLHYSNSAGGVSGPSPGGPTTEVDWSINQARSIRQNLTASGPRPNPQGSYHYGLINTTRTIRLANSAPVINGKQRYAVNSVSFIPADTPLKLADYFNIPGVFTLGSIPDNPNGAGAFLQTSVMEADYRAYVEVVFENPEDTIQSWHIDGQIFFVVGMDGGQWSPDSRSSYNLRDTISRSTVQVYPNSWTAVYMPLDNVGMWNVRSQNWAR*

Click here to download the sequence:
Link to NCBI Protein BLAST