Transcript Information: R_Transcript_379742.p1


Annotated TAIR IDAT5G58420.1
Annotated Gene NameRibosomal protein S4 (RPS4A) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23619599-23620896 | Forward length=262
E-Value3.1E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1388057867279
Replicate 20.079833841887065
Replicate 30.26129358474699
Condition 2: 8 Hour
Replicate 10.093102148088385
Replicate 20.25506709324546
Replicate 30.069017530875996
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379742.p1 GENE.R_Transcript_379742~~R_Transcript_379742.p1 ORF type:complete len:263 (+),score=5.19,Ribosomal_S4e|PF00900.16|1e-35,40S_S4_C|PF16121.1|8e-25,RS4NT|PF08071.8|1.3e-19,KOW|PF00467.25|2.4e+03,KOW|PF00467.25|6.7e-06,S4|PF01479.21|1.1e-05 R_Transcript_379742:42-830(+)
ATGGGTTATCGTGGTATTCGTAAACACTTAAAACGACTTCATGCACCAAAACATTGGATGCTTGATAAGTTGGGCGGTGTTTTTGCACCCAAACCATCAGCTGGTCCACACAAGACACGTGAATGTTTACCAATGATCATCTTTTTACGTAACCGTTTGAAATATGCCTTGACCTATGTTGAAGCAAGAAAAATCTGTAAACAACGTCTCATTAAGATCGACGGACGTGTGCGAACTGATTTTCTCTTTCCAGCCGGTTTCATGGATGTTATTACCATCGAAAAAACAGGTGAACACTTCCGTTTAATCTACGACGTCAAAGGTCGATTCTGTGTCCATCGTATTACAGCTGAAGAAGCGAAATATAAACTATGCAAAGTTAAATCAGTCCGCATGGGTCCAAAGAAAGTCCCATACATCATTACACACGATGCTCGAACAATCCGTTATCCAGATCCACGTATCAAAGCTAACGACACAATTAGACTTGATATCGCTAGTGGAAAAATCGAAGATCATATCAAATTCGATACTGGTAACATTGTTATGATTACTGGTGGACACAATTTAGGTCGTGTTGGTATCATTCAATCACGTGAACGTCATCCAGGTTCATTCGATATTGTTCATGTCAAAGATGCTCAAGGACATACATTCGCTACTCGTTTGGCTTATGTATTTGTTATTGGTCGAGGACAAAAATCCTGGGTGTCATTACCAGCTGGTAAAGGTATTCGTCTCAGCGTTGCCGAAGAACGTGATCGTCGTCTCGCTGGCAAAAGTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379742.p1 GENE.R_Transcript_379742~~R_Transcript_379742.p1 ORF type:complete len:263 (+),score=5.19,Ribosomal_S4e|PF00900.16|1e-35,40S_S4_C|PF16121.1|8e-25,RS4NT|PF08071.8|1.3e-19,KOW|PF00467.25|2.4e+03,KOW|PF00467.25|6.7e-06,S4|PF01479.21|1.1e-05 R_Transcript_379742:42-830(+)
MGYRGIRKHLKRLHAPKHWMLDKLGGVFAPKPSAGPHKTRECLPMIIFLRNRLKYALTYVEARKICKQRLIKIDGRVRTDFLFPAGFMDVITIEKTGEHFRLIYDVKGRFCVHRITAEEAKYKLCKVKSVRMGPKKVPYIITHDARTIRYPDPRIKANDTIRLDIASGKIEDHIKFDTGNIVMITGGHNLGRVGIIQSRERHPGSFDIVHVKDAQGHTFATRLAYVFVIGRGQKSWVSLPAGKGIRLSVAEERDRRLAGKSQ*

Click here to download the sequence:
Link to NCBI Protein BLAST