Transcript Information: R_Transcript_379755.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value8E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3335496587922
Replicate 20.57524110729584
Replicate 30.94137277792407
Condition 2: 8 Hour
Replicate 10.22361520499767
Replicate 20.71473138305159
Replicate 31.0774928678769
Condition 3: 24 Hour
Replicate 10.31449050996855
Replicate 20.20141788941166
Replicate 31.1993262842135


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379755.p1 GENE.R_Transcript_379755~~R_Transcript_379755.p1 ORF type:3prime_partial len:219 (+),score=48.98,SEO_C|PF14577.2|5.9e-16 R_Transcript_379755:245-898(+)
ATGAAGTCTGCTGAGGCCTACCAAAATCTGAAAAATCTCTTTGAGGAGTCTCACACCGACAACACCAACATTCTGAAGCATTTGATATGTCTCCAAGATGACATACTCGTTGAAGGCTCGGAAAAATCACAGGTTTCTATTGAAGAACTCAAAACAAAGACAACACTATTGCTCATATCAGACCTCAACATCTCTGATCAAGAGTTGATAAACCTTCATCATATCTACCAAGAATCAGCAAATAAGTCTGATTATGAAATAGTGTGGCTTCCGATACTCGACAAATCCGATTCCTGGAGTGAAGCAAACAAACAAAGATATGAGCAGCTGCAGAATAAGATGCCTTGGTATACATTGCAACAACCTGAAAAACTTGAAGAAGCAGGCATCAGGTACATTAAAGAGGTATGCAAGTTTGAGCAGAAGACAATGGTAATTGTGATCGACCCACTTGGGAAAATGGTATGGAGAAATGGAATTGCAAGGATTTGGGCATGGGGAAAGGCCTTCCCACTTAATGCTGAGGAGGAGAAAGCACTTTGGAAGGACAAGATTTGGAATCTTGAGCTATTGGTGGATGCCATTGATCCTAACATACAACAATGGATGGGACAAGGGAAATACATTTGCTTGTATGGAGGTGAAGACATGGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379755.p1 GENE.R_Transcript_379755~~R_Transcript_379755.p1 ORF type:3prime_partial len:219 (+),score=48.98,SEO_C|PF14577.2|5.9e-16 R_Transcript_379755:245-898(+)
MKSAEAYQNLKNLFEESHTDNTNILKHLICLQDDILVEGSEKSQVSIEELKTKTTLLLISDLNISDQELINLHHIYQESANKSDYEIVWLPILDKSDSWSEANKQRYEQLQNKMPWYTLQQPEKLEEAGIRYIKEVCKFEQKTMVIVIDPLGKMVWRNGIARIWAWGKAFPLNAEEEKALWKDKIWNLELLVDAIDPNIQQWMGQGKYICLYGGEDMD

Click here to download the sequence:
Link to NCBI Protein BLAST