Transcript Information: R_Transcript_379758.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.14497935187438
Condition 2: 8 Hour
Replicate 12.0146597741404
Replicate 20.2830491372302
Replicate 32.1827886189073
Condition 3: 24 Hour
Replicate 13.7778670121538
Replicate 22.5126244305721
Replicate 30.69264888249675


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379758.p1 GENE.R_Transcript_379758~~R_Transcript_379758.p1 ORF type:internal len:158 (-),score=25.88,SEO_C|PF14577.2|4e-40 R_Transcript_379758:2-472(-)
GACAAGGTTTGGAATATAGAGCTATTGGTGGATGCCATTGATTCTAACATTCAAGAATGGATTCAACAAGGAAAATCCATTTGCTTGTATGGAGGTGAAGACATGGATTGGATTCGTAAATTTACAGCAAACGCCAAGAAAGTTGCTACCTTTGCAACGATAGAGCTGGAGCTAGTTTATGTTGGGAAGAGCTTGAAAACCAGAGAGACCATAGAAAAGGAGAAACTCAGCCACTCATGGCTTGACTTCACTTGGAGCTGGTATTTCTGGACTAGGCTCGAGTGCTTGTTATACTCAAGAATGCAATATTTATCAGAAAACAATAATGAAGATCAGAGCTGTGACTATGAGTATGTTTGGCCTAATTTCTTTCAAAAACAGTTTTTATTTCTCATTTTCCTCCTCTCCCTTCTCCTCTTTCACATTCCCTTTTTCTTCCCTACTCCTCCTTCACTTTCTCCCCCAATTTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379758.p1 GENE.R_Transcript_379758~~R_Transcript_379758.p1 ORF type:internal len:158 (-),score=25.88,SEO_C|PF14577.2|4e-40 R_Transcript_379758:2-472(-)
DKVWNIELLVDAIDSNIQEWIQQGKSICLYGGEDMDWIRKFTANAKKVATFATIELELVYVGKSLKTRETIEKEKLSHSWLDFTWSWYFWTRLECLLYSRMQYLSENNNEDQSCDYEYVWPNFFQKQFLFLIFLLSLLLFHIPFFFPTPPSLSPPIL

Click here to download the sequence:
Link to NCBI Protein BLAST