Transcript Information: R_Transcript_379777.p1


Annotated TAIR IDAT5G58020.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23485585-23486649 | Forward length=354
E-Value1E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22259708481364
Replicate 20.51210488820239
Replicate 30
Condition 2: 8 Hour
Replicate 10.59721621822549
Replicate 20
Replicate 30.22136110512667
Condition 3: 24 Hour
Replicate 10.27997325887444
Replicate 20
Replicate 30.26692322788899


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379777.p1 GENE.R_Transcript_379777~~R_Transcript_379777.p1 ORF type:5prime_partial len:82 (+),score=26.10,Rtf2|PF04641.8|5.8e-07 R_Transcript_379777:2-247(+)
TCAAGGAGGTCAAGTCTTGCACAAAGCCCTCAAGGAGGTCAAGTCTTGCACAAAGCCCTCAAGGAGGTCAAGTCTTGCACTTGTCTTGTGTGTCACCAGGAGTTTGAGGAAGCTGATAAGATTGTCATCAGAGGTGGCTTCCTTGAGAGAGAGCGGATGGAAGAGGAGAAAGCCCTTCAGCTCAAGCTCAAGGCTAATAATATAAGAAGCCCAAGAAGGTCAAGCCAGTCAACGGTGGTGGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379777.p1 GENE.R_Transcript_379777~~R_Transcript_379777.p1 ORF type:5prime_partial len:82 (+),score=26.10,Rtf2|PF04641.8|5.8e-07 R_Transcript_379777:2-247(+)
SRRSSLAQSPQGGQVLHKALKEVKSCTCLVCHQEFEEADKIVIRGGFLERERMEEEKALQLKLKANNIRSPRRSSQSTVVE*

Click here to download the sequence:
Link to NCBI Protein BLAST