Transcript Information: R_Transcript_379964.p1


Annotated TAIR IDAT5G50350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20498697-20501611 | Reverse length=584
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2627637547172
Replicate 23.1234165908543
Replicate 33.4076138572789
Condition 2: 8 Hour
Replicate 13.4401628438278
Replicate 23.5112128510953
Replicate 33.4503061509826
Condition 3: 24 Hour
Replicate 12.0870733843367
Replicate 22.7341230029641
Replicate 32.5324616993104


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379964.p1 GENE.R_Transcript_379964~~R_Transcript_379964.p1 ORF type:internal len:121 (-),score=27.29 R_Transcript_379964:3-362(-)
GAAAATTTTAGGAGTCCAGTGAGGTCTGATTTGCTCCCTAGCGAGATGGATGGAGTTGTTCTCCCTTGGTTGAAGTGGGAGACTAGTAATGATGGCGCTATCCTTGGTAGTGATAATAAGCAACGTCCTGCAACTCCAAAAACTGTTCTACAAGATGCAATGAAGGATGCAACTGCTGAAGAAGATCTTGACCGAAGTGTCACTTCCAAGAGTAGTCGTGGGAGTTGGCGCCCTGGAGTTGTCAATAGCTTCTCTGTAGAGACTCGAGAATTTAGCAGAGCTGTAGAGGTTGATAGCTGCAAAAGTCAACTTCTATCCCAAGTACCAAGAAGATCTCGAGTAGACATAGGCGAGTATCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379964.p1 GENE.R_Transcript_379964~~R_Transcript_379964.p1 ORF type:internal len:121 (-),score=27.29 R_Transcript_379964:3-362(-)
ENFRSPVRSDLLPSEMDGVVLPWLKWETSNDGAILGSDNKQRPATPKTVLQDAMKDATAEEDLDRSVTSKSSRGSWRPGVVNSFSVETREFSRAVEVDSCKSQLLSQVPRRSRVDIGEYL

Click here to download the sequence:
Link to NCBI Protein BLAST