Transcript Information: R_Transcript_379992.p1


Annotated TAIR IDAT5G48670.1
Annotated Gene NameAGAMOUS-like 80
Annotated Gene Symbol(s)FEM111, AGL80
Annotation TypeHomolog
Chromosome Positionchr5:19738825-19739790 | Reverse length=321
E-Value1E-29
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.059169606256969
Replicate 20.056843450748911
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_379992.p1 GENE.R_Transcript_379992~~R_Transcript_379992.p1 ORF type:3prime_partial len:388 (-),score=74.63,SRF-TF|PF00319.14|3.1e-10,SRF-TF|PF00319.14|72 R_Transcript_379992:3-1163(-)
ATGGCTAAGAGGGGGAAGGTCAAGCACACATACATCACTAATGATAATACCAGGACAACATTCAATAAACGACAGATGAACCTCATGAAAAAACTAGATCAAATCACTACTTTATGTGACGTTAAAGCATGTGCAATCATCTATAGTCCTGCGAAAGACAAACCCCTTAACCTTTTCCCAAATGACCCAGTAAAGGTTTTAGGTGTGATCTCTGATTTTAAGAAATTATCAGAGTCAGACCAAAACAACAGAATGTTGGATCAAGAGGAATTTCTAAAAGAGAGAATTGCCAAGGCTAGTGAGCAGCTAAGGAAACTACAAATGGATAATCGTGAGAAGAGGCTCACAAGACTGATGTATGAGTTTTTGGGTGACAAAAGCAAGAGTTTTGATGGTTTGAGAAAATCAGATCTTCAAGAGCTTGACGAGTTGATCAATCAACACCTGAGAGAGATCAATTACCATGTACAGGCCCTGGTGAAGGAGGACCATCCTCCTACTGAAACTCCACCAAATGCTCCACTTGTGTCTGAACCAATTCCTATGTTCGAACCCTCAACATTGGCACCACCAGCCATGGCACCCAACCAATTGTTGCCTGAGCAATGCAGTAACAGTGTCTTCAGCATGAGTGAGGATCCTAAAACAATGGTACCACCAACCATGAAACCCAACCAATTTTATCCTGGGAGAAACGTTCAAGGGCAAGGTGGTGACAGAGTCTTCAACATTAGCATGGATCCAATAACAATGGCAAAACTAGCCTTGGGACCCAGCCAACTTCTGCCTAGGGAAATTGTGCAAGGGCAAGGCAGTGCCAATGTCTTCAACATCGACAAGGATACAGCAACAATGGTAACACTCTCAAGGAGACTCAACGAATTTCTGTCTGGGGAAAACATGCAATATCAAGATGGAGACAGTGTCCTCAACATGGCTTTGCATCCACAAATAATATCACCACTAGCCATGGGACTCAACCAATTTCTCCTTCAAGAAAATGTGCAAGGACTAGGTGGTGCTAGTGTTTTCAACATGAGCAAGGATCCCACAACAATGGAACCACCAGCCACAGGATCCAACCAATTTTTGGCGGGTGGAAACGTGCAATGGCAAGGTGGTGACAGTGTATTCACCATAAGCAAGGATCCCACAAAAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_379992.p1 GENE.R_Transcript_379992~~R_Transcript_379992.p1 ORF type:3prime_partial len:388 (-),score=74.63,SRF-TF|PF00319.14|3.1e-10,SRF-TF|PF00319.14|72 R_Transcript_379992:3-1163(-)
MAKRGKVKHTYITNDNTRTTFNKRQMNLMKKLDQITTLCDVKACAIIYSPAKDKPLNLFPNDPVKVLGVISDFKKLSESDQNNRMLDQEEFLKERIAKASEQLRKLQMDNREKRLTRLMYEFLGDKSKSFDGLRKSDLQELDELINQHLREINYHVQALVKEDHPPTETPPNAPLVSEPIPMFEPSTLAPPAMAPNQLLPEQCSNSVFSMSEDPKTMVPPTMKPNQFYPGRNVQGQGGDRVFNISMDPITMAKLALGPSQLLPREIVQGQGSANVFNIDKDTATMVTLSRRLNEFLSGENMQYQDGDSVLNMALHPQIISPLAMGLNQFLLQENVQGLGGASVFNMSKDPTTMEPPATGSNQFLAGGNVQWQGGDSVFTISKDPTKM

Click here to download the sequence:
Link to NCBI Protein BLAST