Transcript Information: R_Transcript_380005.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31201642657639
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.31028394222884
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_380005.p1 GENE.R_Transcript_380005~~R_Transcript_380005.p1 ORF type:5prime_partial len:117 (+),score=8.59,RVT_1|PF00078.23|2.1e-20 R_Transcript_380005:2-352(+)
TCCCCTCGGACTATGATCAAAGTAGACTTGCAAAAAGCATATGACTCCATAGAATGGAGTTTCCTCAAACAAGTATTGATTAAACTCAAGTTCCCAGGGCAGTTTATAGATTGGATTATGGAATGTGTTACCACAGTTAGGTATACTATCAATGTCAATGGAGACCTGATAGTTCCTTTTGAGGCAATAAGAGGATTGAGGCAAGGAGATCCACTATCTCCCTATTTATTTGTGCTATGCATGGAGTACCTTAGTAGATGTTTGCAACAGCTGGATAAAAACCCTGATTTTAACTACCATTCGAGGTGTGCTAAGTTAAGATCACCCACTTGTGCTTTGCAGATGATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_380005.p1 GENE.R_Transcript_380005~~R_Transcript_380005.p1 ORF type:5prime_partial len:117 (+),score=8.59,RVT_1|PF00078.23|2.1e-20 R_Transcript_380005:2-352(+)
SPRTMIKVDLQKAYDSIEWSFLKQVLIKLKFPGQFIDWIMECVTTVRYTINVNGDLIVPFEAIRGLRQGDPLSPYLFVLCMEYLSRCLQQLDKNPDFNYHSRCAKLRSPTCALQMI*

Click here to download the sequence:
Link to NCBI Protein BLAST