Transcript Information: R_Transcript_380368.p1


Annotated TAIR IDAT5G24740.1
Annotated Gene NameProtein of unknown function (DUF1162)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8470073-8489703 | Reverse length=3464
E-Value1E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.16433466407547
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_380368.p1 GENE.R_Transcript_380368~~R_Transcript_380368.p1 ORF type:internal len:149 (+),score=22.31,VPS13_mid_rpt|PF16910.1|1.6e-06 R_Transcript_380368:3-446(+)
AAAATAGAGTATGTTCTTTCAAACCGCCACAAGGTGATTTGGGATGTCAATTTTGTCAATATTTCTGTCTGTCTGCCGTGGAATAACGCGGACTCAGAACCATGCAGTATGGTGATCCAGACTGTGGACCTTCGACTGTGTTCCAAAACTGATGTGCCTCCTGTTCTATCCAAAATTGATGATCGATGTCAATTCATGAGCAGATGCCTAGGCATGGAAGGTGGTAGTGATATTCTGAATTCAGTGCAGCTCGAGGAGATATATGACCATTATGAAGTGAGCCTGAATGATTTTCAGGTGACATTGATAACGCCCAGTTTCCCTCGAGGATTGTCACTTCTGGAGAACTTTTCTGCTGTTGTGGTGCTTGCACAATGTGTCATCCCAGATGAGTTGATATTGAAACAACTAGAGGTTCATCTTATCGTATCATCTCTTCATTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_380368.p1 GENE.R_Transcript_380368~~R_Transcript_380368.p1 ORF type:internal len:149 (+),score=22.31,VPS13_mid_rpt|PF16910.1|1.6e-06 R_Transcript_380368:3-446(+)
KIEYVLSNRHKVIWDVNFVNISVCLPWNNADSEPCSMVIQTVDLRLCSKTDVPPVLSKIDDRCQFMSRCLGMEGGSDILNSVQLEEIYDHYEVSLNDFQVTLITPSFPRGLSLLENFSAVVVLAQCVIPDELILKQLEVHLIVSSLHL

Click here to download the sequence:
Link to NCBI Protein BLAST