Transcript Information: R_Transcript_38040.p1


Annotated TAIR IDAT5G58000.1
Annotated Gene NameReticulon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23477416-23479496 | Forward length=487
E-Value4E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8656236279898
Replicate 22.8142631582086
Replicate 34.2087680523051
Condition 2: 8 Hour
Replicate 15.4576927894462
Replicate 25.8259526483812
Replicate 36.8068539826451
Condition 3: 24 Hour
Replicate 15.6011517633856
Replicate 24.4176949283837
Replicate 35.0763652436479


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38040.p1 GENE.R_Transcript_38040~~R_Transcript_38040.p1 ORF type:complete len:664 (+),score=116.41,Reticulon|PF02453.13|2.2e-26,Reticulon|PF02453.13|5.1e+02 R_Transcript_38040:290-2281(+)
ATGGAGGGTGGTAAGGGAACCGGAAGAAGAAAGATGATGGTAGGAGCAGGAGGATCAGTTTGGGAGAGTAGAAGGAAAGGTGATCAAAAACTGAATAAACTAAAAGGGAATGGGAGTCCTGATCAGGATAATCAAGATCACAGGCTTAGGCTTAGACCAAGAAATGGGACTGCTATTGTTTCTCCCAAACCCAGGAATTCAGATTGGGATGGAGGTGGTGATGAGATGAAGGATGCACCTGCTTCCACTTCTTTGGTTAAATCCAATCGTAGGAGTCGTAGCAGCAGCAGCAGCAGTAGTAGTAGCAGTAGCAGAAATGCAGATGATCTGTTAAGCAGTCCAATTAGGCTGAAGAAAACCAGATCTGAGCCACTTAAGGCTCAGAGTCGGAGTCCAGTGGTATTGAGAAAGGTGAAATCTGAAGTGAAACCAGTAGCAGTCAATGTTAACAATGAGGAGGAGGAGAATGAGATGGCGACCTGTGACACAACTACAAATACAAATACTAGTAGTAGTAGTAGTAGTAATTTAAATTCCAAAGCAGAGGACTGTTACTCTGTCTCTATTAATCATGCTCATGCACTTGGGAATTCCAATTCCGATTCCTATGAGTCAAGCTGCAAGATGAACACCAAGTCCAAGAAGCAGCCGGAATTTGATCCTTTAGGTATTAATATGAATATGAACATTGGTCATCCGGGCAAGATAAATTCCAGTTCCAATTCAGCAGTGCAAGAGTTAGCAGCAGCCACCTGCGACTGTGAAGGAGGAGTAGAAGCTTGTCACCAACCTGATCAAGACCACAAGGTTACTGCAACACCTCATCAGAATCAGGATGATGGAGATGAAAATAATACTAATATTAATGTTCCAGATCATGACGGAGTTGAAAAGGAGGGGCCTGTTAATAATAATGACGAAGAAATCGAGGTAGAGGTGGTGAGAGAGGGCGACAATTCAGGTTCAGGCAAATTGATTAATTCTGTCAAGGAGGAGAAAATCATACCGGAAACCAAAAAGGCTACTACTACTAGTAGTAGTAGTACTGCCAAAGTGTCACCTTCCCTGCTGCACAAGTCCCACCGTCAACCTCAGCTCATTAAAAAATCCACCACCAATGCGAGTGCTGATGCTCCGCCGTCTCCACCTAACCAATATAAAAGTAAGTTATCTGATGATTCTCACCCAGACCCTCAAGCTCATGCTCATGGTCGGCTTCAGAGTTTAGTGGATTTAGTTATGTGGCGAGATGTATCCAGATCGGCTTTCGTCTTCGGACTTGGCACCTTTCTCATCATCTCATCCTCCTATGCAAAAGACCTCAACATCAGCATCATTTCTGTGGCGGCTTATTTGGGTCTGGTCTACCTCGCGGCTGTATTTCTGTACAGGTCATTTCAATCCAGAGGGGTCGTAGATGAAAGAGTTTTTCAGTCTCCAGAAATTAATAGTATGCTTGGAGAAGATGAAGCTCTTTGGTTGGCCAAATTGATTCTACCCTACCTCAATGAATCGCTACTGAAATTAAGGGGACTTTTCTCAGGAGATCCTGCTGTCACAATGAAGTTGGCCTTGATGCTGTTCGTATTGGCAAGATGTGGTAGCTACATTACAATATGGAAAATGGTCAAGCTTGGCTTTTTTGGCGTTTTTGTGATTCCCAAACTCTATTCGTCCTACTCCGCCCAAATTACTGCATACGGCAAATTTTGGTTTCGACGTTTCCGAGATGCTTGGCAATCCTGTTCACATAAAAAGATCGTAGCTTTTGCCATCTTCACATTCGTGTGGAATTTTTCCTCAGTAGTTGCTCGTGCGTGGGCAGCTTTCATGCTGTTTGCGGCTTTTCGGTACTATCAACAGTCTTTGGGCACAGATGACTGGGTTCAACAAAAAAATGGACAGTATGGTCTACACCAAAAACATATAGGAAGACAAAAGCGCAAAATACCTAGTCCAGCATATCAAAGGAAAGAGAAGAAAAGTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38040.p1 GENE.R_Transcript_38040~~R_Transcript_38040.p1 ORF type:complete len:664 (+),score=116.41,Reticulon|PF02453.13|2.2e-26,Reticulon|PF02453.13|5.1e+02 R_Transcript_38040:290-2281(+)
MEGGKGTGRRKMMVGAGGSVWESRRKGDQKLNKLKGNGSPDQDNQDHRLRLRPRNGTAIVSPKPRNSDWDGGGDEMKDAPASTSLVKSNRRSRSSSSSSSSSSSRNADDLLSSPIRLKKTRSEPLKAQSRSPVVLRKVKSEVKPVAVNVNNEEEENEMATCDTTTNTNTSSSSSSNLNSKAEDCYSVSINHAHALGNSNSDSYESSCKMNTKSKKQPEFDPLGINMNMNIGHPGKINSSSNSAVQELAAATCDCEGGVEACHQPDQDHKVTATPHQNQDDGDENNTNINVPDHDGVEKEGPVNNNDEEIEVEVVREGDNSGSGKLINSVKEEKIIPETKKATTTSSSSTAKVSPSLLHKSHRQPQLIKKSTTNASADAPPSPPNQYKSKLSDDSHPDPQAHAHGRLQSLVDLVMWRDVSRSAFVFGLGTFLIISSSYAKDLNISIISVAAYLGLVYLAAVFLYRSFQSRGVVDERVFQSPEINSMLGEDEALWLAKLILPYLNESLLKLRGLFSGDPAVTMKLALMLFVLARCGSYITIWKMVKLGFFGVFVIPKLYSSYSAQITAYGKFWFRRFRDAWQSCSHKKIVAFAIFTFVWNFSSVVARAWAAFMLFAAFRYYQQSLGTDDWVQQKNGQYGLHQKHIGRQKRKIPSPAYQRKEKKSF*

Click here to download the sequence:
Link to NCBI Protein BLAST