Transcript Information: R_Transcript_38041.p1


Annotated TAIR IDAT5G58000.1
Annotated Gene NameReticulon family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23477416-23479496 | Forward length=487
E-Value9.9E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7754958117847
Replicate 21.9592193234493
Replicate 32.8856076909617
Condition 2: 8 Hour
Replicate 13.3891788185145
Replicate 23.3384831364756
Replicate 33.3028591642073
Condition 3: 24 Hour
Replicate 14.6772515502787
Replicate 23.3957552568696
Replicate 32.9274379519023


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38041.p1 GENE.R_Transcript_38041~~R_Transcript_38041.p1 ORF type:complete len:643 (+),score=111.06,Reticulon|PF02453.13|2.6e-26,Reticulon|PF02453.13|4.9e+02 R_Transcript_38041:290-2218(+)
ATGGAGGGTGGTAAGGGAACCGGAAGAAGAAAGATGATGGTAGGAGCAGGAGGATCAGTTTGGGAGAGTAGAAGGAAAGGTGATCAAAAACTGAATAAACTAAAAGGGAATGGGAGTCCTGATCAGGATAATCAAGATCACAGGCTTAGGCTTAGAATTTCTCCCAAAGCCAGGAATTCAGATTGGGATGGTGGTGGTGATGAGTTGAAGAATGCACCTGCTTCCACTTCTTTGGTTAAATCCAATCGTAGGAGTCGTAGCAGCAGCAGCAGCAGTAGTAGTAGCAGTAGCAGAAATGCAGATGATCTGTTAAGCAGTCCAATTAGGCTGAAGAAAACCAGATCTGAGCCACTTAAGGCTCAGAGTCGGAGTCCAGTGGTATTGAGAAAGGTGAAATCTGAAGTGAAACCAGTAGCAGTCAATGTTAACGAGGAGGAGGAGGAGGAGAATGAGGCGACCTGTGACACAAAAACAAATACTAGTAGCAGTAATTTAAACTGCTACTCTGTCTCTATTAATCATGCTCATGCACTGGGGAAGAATTCCAATTCGGATTCCTATGAGTCAAGTTGCAAGATGAACACCAAGTCCAAGAAGCAGCCGGAATTTGATCCTTTAGGTATTAATATGAATATGAACATTGGTCATCCGGGCAAGATAAATTCCAGTTCCAATTCAGCAGTGCAAGAGTTAGCAGCAGCCACCTGCGACTGTGAAGGAGGAGTAGAAGCTTGTCACCAACCTGATCAAGACCACAAGGTTACTGCAACACCTCATCAGAATCAGGATGATGGAGATGAAAATAATACTAATATTAATGTTCCAGATCATGACGGAGTTGAAAAGGAGGGGCCTGTTAATAATAATGACGAAGAAATCGAGGTAGAGGTGGTGAGAGAGGGCGACAATTCAGGTTCAGGCAAATTGATTAATTCTGTCAAGGAGGAGGAAATCATACCGGAAACCAATAAGGCTACTACTAGTACTAGTAGTATTGCCCAAGTGTCACCTTCCCTGCTGCACAAGTCCCACCGTCAACCTCAGCTCGTTAAAAAATCCACCTCCAAGATTCATGTTTCCAGCCCCAATGCCAGTGCTGATGCTCCGTTGTCTCCACCTAACCAATGTCCTCAAGCTCAAACTCATGGTCGGCTTCAGAGTTTAGTGGATTTAGTCATGTGGCGAGATGTATCCAGATCTGCTTTCGTGTTCGGATTTGGCACCTTTCTCATCATCTCATCCTCCTATGCAAAAGACCTCAACATCAGCATCATTTCTGTGGCGGCTTATTTGGGTCTGGTCTACCTCGCGGCTGTATTTCTGTACAGGTCATTTCAATCCAGAGGGGTCGTAGATGAAAGAGTTTTTCAGTCTCCAGAAATTAATAGTATGCTTGGAGAAGATGAAGCTCTTTGGTTGGCCAAATTGATTCTACCCTACCTCAATGAATCGCTACTGAAATTAAGGGGACTTTTCTCAGGAGATCCTGCTGTCACAATGAAGTTGGCCTTGATGCTGTTCGTATTGGCAAGATGTGGTAGCTACATTACAATATGGAAAATGGTCAAGCTTGGCTTTTTTGGCGTTTTTGTGATTCCCAAACTCTATTCGTCCTACTCCGCCCAAATTACTGCATACGGCAAATTTTGGTTTCGACGTTTCCGAGATGCTTGGCAATCCTGTTCACATAAAAAGATCGTAGCTTTTGCCATCTTCACATTCGTGTGGAATTTTTCCTCAGTAGTTGCTCGTGCGTGGGCAGCTTTCATGCTGTTTGCGGCTTTTCGGTACTATCAACAGTCTTTGGGCACAGATGACTGGGTTCAACAAAAAAATGGACAGTATGGTCTACACCAAAAACATATAGGAAGACAAAAGCGCAAAATACCTAGTCCAGCATATCAAAGGAAAGAGAAGAAAAGTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38041.p1 GENE.R_Transcript_38041~~R_Transcript_38041.p1 ORF type:complete len:643 (+),score=111.06,Reticulon|PF02453.13|2.6e-26,Reticulon|PF02453.13|4.9e+02 R_Transcript_38041:290-2218(+)
MEGGKGTGRRKMMVGAGGSVWESRRKGDQKLNKLKGNGSPDQDNQDHRLRLRISPKARNSDWDGGGDELKNAPASTSLVKSNRRSRSSSSSSSSSSSRNADDLLSSPIRLKKTRSEPLKAQSRSPVVLRKVKSEVKPVAVNVNEEEEEENEATCDTKTNTSSSNLNCYSVSINHAHALGKNSNSDSYESSCKMNTKSKKQPEFDPLGINMNMNIGHPGKINSSSNSAVQELAAATCDCEGGVEACHQPDQDHKVTATPHQNQDDGDENNTNINVPDHDGVEKEGPVNNNDEEIEVEVVREGDNSGSGKLINSVKEEEIIPETNKATTSTSSIAQVSPSLLHKSHRQPQLVKKSTSKIHVSSPNASADAPLSPPNQCPQAQTHGRLQSLVDLVMWRDVSRSAFVFGFGTFLIISSSYAKDLNISIISVAAYLGLVYLAAVFLYRSFQSRGVVDERVFQSPEINSMLGEDEALWLAKLILPYLNESLLKLRGLFSGDPAVTMKLALMLFVLARCGSYITIWKMVKLGFFGVFVIPKLYSSYSAQITAYGKFWFRRFRDAWQSCSHKKIVAFAIFTFVWNFSSVVARAWAAFMLFAAFRYYQQSLGTDDWVQQKNGQYGLHQKHIGRQKRKIPSPAYQRKEKKSF*

Click here to download the sequence:
Link to NCBI Protein BLAST