Transcript Information: R_Transcript_38052.p1


Annotated TAIR IDAT4G24560.1
Annotated Gene Nameubiquitin-specific protease 16
Annotated Gene Symbol(s)UBP16
Annotation TypeOrtholog
Chromosome Positionchr4:12679493-12684528 | Reverse length=1008
E-Value4.7E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.435924117597
Replicate 213.262821439435
Replicate 315.547559454402
Condition 2: 8 Hour
Replicate 111.411964206182
Replicate 213.355820828219
Replicate 314.455581308544
Condition 3: 24 Hour
Replicate 116.350945057197
Replicate 216.486555514585
Replicate 317.549779504607


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38052.p1 GENE.R_Transcript_38052~~R_Transcript_38052.p1 ORF type:5prime_partial len:1105 (+),score=270.44,UCH|PF00443.25|6.1e-46,UCH_1|PF13423.2|7.9e-19,zf-MYND|PF01753.14|6.7e-09,zf-MYND|PF01753.14|6.4e+03,zf-MYND|PF01753.14|9.1e+03,zf-MYND|PF01753.14|6.4e+02 R_Transcript_38052:2-3316(+)
AATCGTCTTCTTGTTTTGGCCTCTGAAGAGGCTGCTCGTGCTGAGCTTGAAGCCTCTTTATCTTTTTCTTCTCCTCCTAATTATTCTACTACTACTAGTAGTAGTAGTAGTAGTTCTTTTACTGCCAGTACTGCTACTTACAGTTCTAATAATAGCTCGTCCTTTGGTGCTGTTCCTTCTCAACGATTTTGTGCCGTTTGCTACACACCTACCCCTAATCGATGCGCCAGATGCAAGGCTGTCAATTACTGCTCGGGCAAGTGCCAAATAATTCATTGGAGACAAGGTCACAAGGATGAGTGCCATCCACCTGCAGTTAGTTTTGAAACTGACCAAGCAAATACTTTTGCGGGGAATGCTGTGAAGCAACCGTACCCTGGTGACTATGCAGACAGCTTAGAGAATGATGAAATAGAACTTGCTGAACAAGGTGACATTGTTCATGAGAAACCTGGAATCTCCAATCCTGTGTCCTCTCCATCAGAATTGTGGGAAAAGGATGATTTTGATGCTTCTGATAAAACTCTTAATGGAAAGACTCTGGATTCCCTGCCTGAAATTCATGGCAGCCCAGATTTAACTGTTGCTCATGAATCATCTTCCAGTGATGGCATGTGCATTGATGGTTCCATCTCAGATGATGATAGTATACATGATCTAATTTCTGATTCTTGTGATTCTTGCAACTCACTTGACAACCTTGAGACTGGTTTGAGCAATGGGGATGTGGAGCAAACCGTGCTTGCAGATGAGGAAAGTTATATGAGGGTAGAAGCTGAGGGTAATGTTTCTGCTTTGGATGGTCATAAAGAAGGAGACAAAACAACTGATTCGTTGGGTTCAAGCATTAGTTGCTCTGACAAAAAATCAGTTGAGGCTCCATTATCCACTTCTGATTTCTGGAATGGATCCCTTGACTCTGGCAGGACCAGAAACTTTACCCGGTCTAGCAATGCCAAAGCAAAACTTAGTGGATCTGGTGATGGAAAAGTTTCAGACTTGAAACCCTCTGTACAGTTGTTCAATCTTTCGGATAGTTCGTCATCAGAATCGCATTCACAAGCCCCCCAAGTGTCAGTTGAGCCTCATCCTCTCTCTGCAAGAGCTGTTAAGCTAGTTGTTGAACCTACTTTACCAGAAAGAAAATCAACCAATGATGGAAGACGTAGGAGCTCATCAATCATAAGCTCTAGAATCCCTGACACCAGGGTTAAGGAGTTTACAGTTGATGGGGATACCCTTAAGTCTGAAGAAGTTAGACCTCCAGTTGGCACTTCAAAAGACAATGTCTTATCATCTTGTGGTTCAAAGGGAGCACATGATTTGGACAGCACCAAAGACACTTCAGTGTCACCGATATCCAATAAAGCTGTAGTGTCTCCAAAAGTTTCCAATGGTTCTTCATCATCTGGCACAAAGGGAAGATCTGCCCCACCTGTGAAGTCTGTCAAAGGTAGTAGTAATGGTACTATGGCTCCTCAAATGTCCAGTTCTACACCAAGTACTGCTGCTGGATTGAAGACGTCTATGCTAAAGGTTGTGGAGCAGCTTAGAGCCCCCAAATTTTCAAAATATGATGATAGCACTGGGAAAAGTAATGAGATGGGAACTTTTCCGTATGAATTTTTTGTCAAGCTTTATCATTGGAACAAGATTGAATTTCGTCCTTTTGGTCTGATCAATTGTGGAAACAGTTGTTATGCGAATGTTGTGCTTCAGTGTTTGGCATTTACTCCTCCACTTGCTGCTTATTTTCTTCAAGGATTCCATTCCAAAGCTTGTGCAAAGAAAGAATGGTGCTTCACCTGTGAGTTTGAGAAGTTAGTCTTAAAGGGCAAGGAAGGGGGTTCTCCACTGTCTCCTATAGGCATAGTATCCCAAATACCAAAGATTGGGAGCCATCTTGCCAATGGGAGGGAAGAAGATGCACATGAGTTTCTGAGGTCTGCTATTGAGACGATGCAATCTATATGTCTTCAAGAAGCAAAGAAGAGTGTTTCCAGCTCTTTGGAGGAGGAAACAACTCTTATGGGCCTCACTTTTGGAGGTTATTTACGATCGAAGATACAATGCACAAGGTGCTGTGGAAAATCTGAGAGACATGAAAGAATGATGGATCTCACTGTGGAGATAGAAGGAGACATAGAGACCTTGGAAGATGCTCTACGGCAGTTTACTGGGACTGAGAGTCTTGATGGAGAGAACAAGTACCACTGTGGCAGGTGCAAATCTTATGAGAAAGCAAAGAAGAAATTAAGCATATCAGAGGCTCCGAATGTCCTTACAATTGCATTAAAGCGGTTTCAGTCAGGTAAATTTGGAAAGCTCAACAAGTCCATTCGAATCCCGGAGATTTTAAATCTAGCCCCATATATGAGGGGATCAAGTGACAAATCACCAATATACAGACTTTACGGAGTTGTGGTTCACTTGGATATCATGAATGCTGCCTTTTCGGGTCACTATGTGTGTTATGTTCTGAACATGCAAAACAAATGGTACAAGATTGATGATAGCATGGTCAAGCCTGTGGAACCGGATAGAGTGCTGAACAAAGGGGCATACATGCTGTTCTACTCAAGGTTGTCTCCACGGGCTCCACGATCCATAAGAAGCACTATAGTATATCGTGATCTCCCTAATAAGGTGAAAAATCCAGCTGATCCTTCTCGGAGCAGTGGGAGGAATATTCCAAGATACAGGGATCAGTCTCTGGATGCTAATCATATTCGTGATGACTTGGCCAATCTTGGTTATATTCATCGAGATGAAACAAGCCGGATCCCGCATATTTTTGATATTGACTCCTCCAGTGACAATTCTTCCCTCTTTAGCCACTCAGATGAAGTCTCAAGCAGCACAGATACCAACAGGGAATCTATCAGTGCAGATGACTTGTCCGATTATATTTTTGGTTATAATGGCTTGTGGAGACATTCTTTAGATTCCGACGCCTCATCATCATCCTCATCTTCTCCCGTTTATTCAAAGCATTCACCCCTTTCCAATGCAGAGAGGTATGCTTCGACTTCTTGTGAACCTCAGTCTTTGCAAAGTGGTAATGCTCAGGCAGTTGCAATAGGTCATCCTTCCTGGGTGAGCATACCTCTCGAGACTTGTAGAGCTGAGGAATCGGGCTCAGGGGCTGGAGTTTCATTTTTGCAATCTAACAGTAGTAGTATGCAAAGTAGGAAGCTAGTAAATATTAGTAGTTGTAGGGGGGCTGACTCTGAGAGACTAGGATGGGCTAACCCTTTGGATAATGTGAACTCTGGTGTACATCTGAGACGATCATCGAGGAAAAAGGCAGATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38052.p1 GENE.R_Transcript_38052~~R_Transcript_38052.p1 ORF type:5prime_partial len:1105 (+),score=270.44,UCH|PF00443.25|6.1e-46,UCH_1|PF13423.2|7.9e-19,zf-MYND|PF01753.14|6.7e-09,zf-MYND|PF01753.14|6.4e+03,zf-MYND|PF01753.14|9.1e+03,zf-MYND|PF01753.14|6.4e+02 R_Transcript_38052:2-3316(+)
NRLLVLASEEAARAELEASLSFSSPPNYSTTTSSSSSSSFTASTATYSSNNSSSFGAVPSQRFCAVCYTPTPNRCARCKAVNYCSGKCQIIHWRQGHKDECHPPAVSFETDQANTFAGNAVKQPYPGDYADSLENDEIELAEQGDIVHEKPGISNPVSSPSELWEKDDFDASDKTLNGKTLDSLPEIHGSPDLTVAHESSSSDGMCIDGSISDDDSIHDLISDSCDSCNSLDNLETGLSNGDVEQTVLADEESYMRVEAEGNVSALDGHKEGDKTTDSLGSSISCSDKKSVEAPLSTSDFWNGSLDSGRTRNFTRSSNAKAKLSGSGDGKVSDLKPSVQLFNLSDSSSSESHSQAPQVSVEPHPLSARAVKLVVEPTLPERKSTNDGRRRSSSIISSRIPDTRVKEFTVDGDTLKSEEVRPPVGTSKDNVLSSCGSKGAHDLDSTKDTSVSPISNKAVVSPKVSNGSSSSGTKGRSAPPVKSVKGSSNGTMAPQMSSSTPSTAAGLKTSMLKVVEQLRAPKFSKYDDSTGKSNEMGTFPYEFFVKLYHWNKIEFRPFGLINCGNSCYANVVLQCLAFTPPLAAYFLQGFHSKACAKKEWCFTCEFEKLVLKGKEGGSPLSPIGIVSQIPKIGSHLANGREEDAHEFLRSAIETMQSICLQEAKKSVSSSLEEETTLMGLTFGGYLRSKIQCTRCCGKSERHERMMDLTVEIEGDIETLEDALRQFTGTESLDGENKYHCGRCKSYEKAKKKLSISEAPNVLTIALKRFQSGKFGKLNKSIRIPEILNLAPYMRGSSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVLNMQNKWYKIDDSMVKPVEPDRVLNKGAYMLFYSRLSPRAPRSIRSTIVYRDLPNKVKNPADPSRSSGRNIPRYRDQSLDANHIRDDLANLGYIHRDETSRIPHIFDIDSSSDNSSLFSHSDEVSSSTDTNRESISADDLSDYIFGYNGLWRHSLDSDASSSSSSSPVYSKHSPLSNAERYASTSCEPQSLQSGNAQAVAIGHPSWVSIPLETCRAEESGSGAGVSFLQSNSSSMQSRKLVNISSCRGADSERLGWANPLDNVNSGVHLRRSSRKKAD*

Click here to download the sequence:
Link to NCBI Protein BLAST