Transcript Information: R_Transcript_380709.p3


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1921364311023
Replicate 20
Replicate 30.24112355364371
Condition 2: 8 Hour
Replicate 10.38661892021966
Replicate 20.11768885179571
Replicate 30.57320875643327
Condition 3: 24 Hour
Replicate 10.12083056435634
Replicate 20.34824092985122
Replicate 30.34559533716154


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_380709.p3 GENE.R_Transcript_380709~~R_Transcript_380709.p3 ORF type:complete len:190 (+),score=28.45,zf-RVT|PF13966.2|1.9e-18 R_Transcript_380709:2812-3381(+)
ATGCTTGGTGAATGCTGTAAAGGAGGAAAGTTTAGTATGCAAAAGATGTATGATAAATGGAGAAACAAGGGAGACAAGCAAGCGTGGACTCACTTGATTTGGTTAGCATGTGCTATGCCAAGAACACAGTTCATTGCATGGATGGCCTTGCACAGACAGCTCAAGACAAAGGATTGTTTGAAGAGATTGGGGATCATCAATGAGGATCAATGCATTCTCTGTAAAGCTCATCCAGAAACAAGTGAACACCTATTCTTCTCTTGCACTGTTAGCACTAATATTTGGGGGCAGCTGCTTAGTTGGACAGGTGCACATAGGAAGGTGTATAGCTTAAAGAAGGAACCGAATTGGTTCTTAAACAGAAGGAAGAATAAAACAGTTATTCAGCAGATAAGAAAATCCTTGCTAGTGCTAACCATTGCAGAAAAATGGAGTGAAAGGAACCTAAGAGGGTTTCAGGCAGTCTCAAGGACCTTTGAAGATATAATCAGACAGATAAAGATTCAGTGTTGCATAAAGATTGTGCAAAAATATGGACAAAAAGCTGAAATTCTAAAGTTGTTAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_380709.p3 GENE.R_Transcript_380709~~R_Transcript_380709.p3 ORF type:complete len:190 (+),score=28.45,zf-RVT|PF13966.2|1.9e-18 R_Transcript_380709:2812-3381(+)
MLGECCKGGKFSMQKMYDKWRNKGDKQAWTHLIWLACAMPRTQFIAWMALHRQLKTKDCLKRLGIINEDQCILCKAHPETSEHLFFSCTVSTNIWGQLLSWTGAHRKVYSLKKEPNWFLNRRKNKTVIQQIRKSLLVLTIAEKWSERNLRGFQAVSRTFEDIIRQIKIQCCIKIVQKYGQKAEILKLLE*

Click here to download the sequence:
Link to NCBI Protein BLAST