Transcript Information: R_Transcript_380709.p4


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10084508814762
Replicate 20.11600165975855
Replicate 30.37966968391413
Condition 2: 8 Hour
Replicate 10
Replicate 20.12354078365296
Replicate 30.1002851415491
Condition 3: 24 Hour
Replicate 10.50735485586086
Replicate 20
Replicate 30.36277963569443


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_380709.p4 GENE.R_Transcript_380709~~R_Transcript_380709.p4 ORF type:complete len:181 (+),score=25.53,RVT_1|PF00078.23|3.5e-13 R_Transcript_380709:1944-2486(+)
ATGTCACCATATCTTTTTGTTCTTTGTATGGAAGTCATGTCAAGAATGATGAGGAGGTGCTTCACTACCAAGGAGTTCAAAGCTCACCCAAAGTGTGCAAAACTTCATCTCAATCATGTGATCTTTGCAGACAATATGCTCCTATTCTCTAGAGGTGATAAAGCATCAATAGCAATACTTCAAGATACTTTTAATACTTTTTCAAGGATGTCAGGGTTGTACGCAAATAAGGAGAAGAGCTGCATTTACTTTTGTGGGGTTGATCAGAAAATGAAGGATGAAATCCTGGCCAGTACAGGGTTTAGTGAAGGAAAGATGCCATTCAGATATCTTGGGGTTCCACTTTCTTCCTCTAGACTTACAAGAAGTTTATGTATGCCTCTGATCAACAAGACTGAGATGAAAATTAAACATTGGGCCAATGGATATCTAAGTTATGCAGGCAGATTGCAATTGCTCCTGGCAGTGATCTTTTCCATTCAGGTTTACTGGTGTGCATTTTTTCTATTACTTAAGGAGATCTATGATATTCAGCAACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_380709.p4 GENE.R_Transcript_380709~~R_Transcript_380709.p4 ORF type:complete len:181 (+),score=25.53,RVT_1|PF00078.23|3.5e-13 R_Transcript_380709:1944-2486(+)
MSPYLFVLCMEVMSRMMRRCFTTKEFKAHPKCAKLHLNHVIFADNMLLFSRGDKASIAILQDTFNTFSRMSGLYANKEKSCIYFCGVDQKMKDEILASTGFSEGKMPFRYLGVPLSSSRLTRSLCMPLINKTEMKIKHWANGYLSYAGRLQLLLAVIFSIQVYWCAFFLLLKEIYDIQQL*

Click here to download the sequence:
Link to NCBI Protein BLAST