Transcript Information: R_Transcript_380892.p2


Annotated TAIR IDAT2G02520.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:676771-678145 | Reverse length=211
E-Value5E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7058842013756
Replicate 21.4717033002078
Replicate 32.2478574276598
Condition 2: 8 Hour
Replicate 11.6018790152403
Replicate 21.358371326801
Replicate 31.3571297660102
Condition 3: 24 Hour
Replicate 11.8237510414531
Replicate 21.7520532763543
Replicate 32.0455798772801


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_380892.p2 GENE.R_Transcript_380892~~R_Transcript_380892.p2 ORF type:complete len:214 (+),score=31.18,zf-RVT|PF13966.2|6.6e-20,zf-RVT|PF13966.2|7.1e+03 R_Transcript_380892:4964-5605(+)
ATGCAATGTCCCTCTCAGGCCTCATGGATGATAAAGAAAGTTTTCCACATGAGGAAGCATATAAACAATGTTACCCCTTGGGAAGGTATAGTAAAAGGGCAAAAATACAGCATCAAAGCAGCTTATATGAGAATGCAAGGTGACTACCCTAAGGTGGAATGGAGGGAATTGATTCTGAATAACATGGCCCCTGCAAAATCATTGTTTATTGTTTGGCTGGCTATGTTAGGGAGATTGAGAACAAAAGATAGACTCATTGTTTGGGGGATAAATGTAGACCCTCTTTGTGTCTTGTGTAGGAACGCAAAGGAAACTCACTCTCATCTATTCTTTGAGTGTAACTTTAGTAAACAGGTTTGGCAAAACATCCTAGACTGGATGAAGATCAGCAGGAATGTAGAGCATTGGGAGCAAGAAACCAGATGGATTATGCAGCAGGCTAAGGGGAAGCAGAACAAAGTTAAAATGTTGAAAATTTGTTTTGATGTTACCTTGCACTGTATATGGATGGAAAGAAACAGAAGAGTATTCCAGCAGCTTGGAAAGGATCCCCCTGAGATTACTAGACAGATTCAGTTCATGACATGCTGCAAAGGAATGGTTGACAAGAAGCTTGCTTCATTTATAGAGAACTTGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_380892.p2 GENE.R_Transcript_380892~~R_Transcript_380892.p2 ORF type:complete len:214 (+),score=31.18,zf-RVT|PF13966.2|6.6e-20,zf-RVT|PF13966.2|7.1e+03 R_Transcript_380892:4964-5605(+)
MQCPSQASWMIKKVFHMRKHINNVTPWEGIVKGQKYSIKAAYMRMQGDYPKVEWRELILNNMAPAKSLFIVWLAMLGRLRTKDRLIVWGINVDPLCVLCRNAKETHSHLFFECNFSKQVWQNILDWMKISRNVEHWEQETRWIMQQAKGKQNKVKMLKICFDVTLHCIWMERNRRVFQQLGKDPPEITRQIQFMTCCKGMVDKKLASFIENLC*

Click here to download the sequence:
Link to NCBI Protein BLAST