Transcript Information: R_Transcript_380949.p1


Annotated TAIR IDAT1G48790.1
Annotated Gene Nameassociated molecule with the SH3 domain of STAM 1
Annotated Gene Symbol(s)AMSH1
Annotation TypeHomolog
Chromosome Positionchr1:18043925-18047427 | Reverse length=507
E-Value1E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7349125091833
Replicate 22.7995067221731
Replicate 37.8264686786854
Condition 2: 8 Hour
Replicate 19.9983948534585
Replicate 29.1306934184841
Replicate 38.6220150446838
Condition 3: 24 Hour
Replicate 18.9918078308508
Replicate 25.6976085467325
Replicate 36.5663114060692


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_380949.p1 GENE.R_Transcript_380949~~R_Transcript_380949.p1 ORF type:internal len:120 (-),score=32.61 R_Transcript_380949:3-359(-)
TCTGGACTTTCTGGGCAGTGGCAACCACCTGTCAATAGAAAAGGGGTCCGGTACCCTAGTGATATTGATCTGACTCCTGTTGAGATCCCGAGGATCCAAGAAGTCGTGAGTGTTGAAGATGGAGTAGCAGTAAGAAAAGATGATAGCACCTTGGATTCTGAAAAGCCAAGATTGGAGCCAATCCTTGAACGTAATGATGATAGTCAGAAGCCACAAACTAATGAGCAGCCCATGATTTCATTTGAATGTTCCGATCCACCAGATACAGTTATCTGCAAGCAACCTACCCCTCCAGCTGTACTTGCAGAGGTCCATGACCTGATACCTGCAGAGGCAGCAGTAGCTATGGAGAAACAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_380949.p1 GENE.R_Transcript_380949~~R_Transcript_380949.p1 ORF type:internal len:120 (-),score=32.61 R_Transcript_380949:3-359(-)
SGLSGQWQPPVNRKGVRYPSDIDLTPVEIPRIQEVVSVEDGVAVRKDDSTLDSEKPRLEPILERNDDSQKPQTNEQPMISFECSDPPDTVICKQPTPPAVLAEVHDLIPAEAAVAMEKQ

Click here to download the sequence:
Link to NCBI Protein BLAST