Transcript Information: R_Transcript_381301.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value2E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.075425458490573
Replicate 20.17352314393635
Replicate 30.23663985119992
Condition 2: 8 Hour
Replicate 10.050590630056292
Replicate 20.046200169093359
Replicate 30.075006655456145
Condition 3: 24 Hour
Replicate 10.42690137406888
Replicate 20.22784358358034
Replicate 30.3165577124138


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_381301.p1 GENE.R_Transcript_381301~~R_Transcript_381301.p1 ORF type:5prime_partial len:484 (+),score=73.02,zf-RVT|PF13966.2|1.2e-19,RVT_3|PF13456.2|7.6e-17 R_Transcript_381301:3-1454(+)
AAGGGTCGCTGTGATATAGACATGTTTGAAGCTAAAAGGAATGCCTCAAATGTGTGGCGTGGAATTATGAGTGCTGCTCATATTATTCGTAAAGGAGCTCGCAAAGATGTGGGTAATGGTCAAAGTACCATGTTTTGGTATCATAACTGGATATCACCCACCCCTCTGGCAGACGTAGCTTTAACTGAAATCCCTTTGGAGATTAGAGATGCAACTGTTGAGGAGATGTGGGACCATCAGAGTGGTTGGCACTGGGATGAATTTGCTGATTTACTGCCTAGAGAGATCTTGAAAAGATTCGAAGCAATTGAACTTACTCGTGACGCAGAAGATGAAGATGTGTTCTACTGGGATGGGTCTCCATCAGGTGGCTTTACTTTTAAGTCAACCATGGCTCTCATCCGAGAGAACATTGATACTATGAGCGATGAGGTGTGGAACATAATTTGGAAAATTCCTGTGCAACAAAGAGTCAGAATGTTCCTTTGGCTTGTGCTACATGATAGAGCATTAACTAATGCACAAAGGGTGCGTCGTGGGTTAGCTTCGGACCCAAGCTGTGGGCTGTGCAACGCCCCGGAGGAAAATATCAATCACATACTGAGAGGTTGTAGTGTGGCAACTTATGTCTGGAAGGAATTGGGTGTCCCTGAAAACAATGTACCTTTCTTTACAATGCCTCTACGGGATTGGATCATGGATAATGTCGTCCACAGGTCACAACTTACTAGAGATGATTGGCCACAATTGTTTGCTTTGACTGTCTGGTGGCTGTGGAAGTGGAGAAATGCAAGGATATTTAATCGCTCTTCAGACCTACCTACTGATCCCATCAGTTTCCTTTATGAGAGACTAGATGCTCTTCAAAAAGCGCTAGCAGGAAATGAAGATCAAGGAAATACAAGCAATACAAGAAGAATGGAAGCGATGCTCTATTGGAAACCTCCAGCGGAGAATTGGGTGATGCTGAATTGCGATGGTGCAGCCAAAGGAAATCCAGGTGCAGCAGGAGGAGGAGGGATTATCAGAGACTCCAGGGCCAAATTTATTAAAGCTTTTTCTGCTAACTTTGGTTACTGCACAACCTTCAGGGATGAACTTTTGGCTCTCAGAAAAGGGCTCATGCTAGCCTGGGGTGCGGGAGTCAGACAAGTTGAGGTGTGCGTGGACTCTATGTCAGTAGTTGGAGTTTTAACAGGGGACCCCCCCACCACCCATGCCCATTTCCAGCTGATCATGCAATGTAGAAGACTTATCCAGGTAGAAGATTGGAGCATTCGCCTGCATCATTGTTATAGGGAGATAAATGGAGCAGCAGACTGGTTAGCAAACAATGGAGTGGAACTAAGCTGCAACTATGTTGAGTATAACCAACCACCTGAAGGACTGGGCAAAATCCCACAGCAAGACCTGCAAGGAGTTGCCCGGACAAGAGCTATTGTAATCAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_381301.p1 GENE.R_Transcript_381301~~R_Transcript_381301.p1 ORF type:5prime_partial len:484 (+),score=73.02,zf-RVT|PF13966.2|1.2e-19,RVT_3|PF13456.2|7.6e-17 R_Transcript_381301:3-1454(+)
KGRCDIDMFEAKRNASNVWRGIMSAAHIIRKGARKDVGNGQSTMFWYHNWISPTPLADVALTEIPLEIRDATVEEMWDHQSGWHWDEFADLLPREILKRFEAIELTRDAEDEDVFYWDGSPSGGFTFKSTMALIRENIDTMSDEVWNIIWKIPVQQRVRMFLWLVLHDRALTNAQRVRRGLASDPSCGLCNAPEENINHILRGCSVATYVWKELGVPENNVPFFTMPLRDWIMDNVVHRSQLTRDDWPQLFALTVWWLWKWRNARIFNRSSDLPTDPISFLYERLDALQKALAGNEDQGNTSNTRRMEAMLYWKPPAENWVMLNCDGAAKGNPGAAGGGGIIRDSRAKFIKAFSANFGYCTTFRDELLALRKGLMLAWGAGVRQVEVCVDSMSVVGVLTGDPPTTHAHFQLIMQCRRLIQVEDWSIRLHHCYREINGAADWLANNGVELSCNYVEYNQPPEGLGKIPQQDLQGVARTRAIVIS*

Click here to download the sequence:
Link to NCBI Protein BLAST