Transcript Information: R_Transcript_381593.p1


Annotated TAIR IDAT1G09220.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2977952-2979466 | Reverse length=504
E-Value3E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.0622967950673
Replicate 20
Replicate 30.31271996718297
Condition 2: 8 Hour
Replicate 10
Replicate 20.076317002870941
Replicate 30.43365622642563
Condition 3: 24 Hour
Replicate 10.31341716351815
Replicate 20.1505478422565
Replicate 30.37351031888903


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_381593.p1 GENE.R_Transcript_381593~~R_Transcript_381593.p1 ORF type:complete len:293 (-),score=56.89,PPR|PF01535.16|5.8e+03,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|0.00013,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|0.0008,PPR|PF01535.16|0.16,PPR|PF01535.16|3.4,PPR|PF01535.16|3.1e+02,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|0.0042,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|0.66,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|86,PPR_2|PF13041.2|1.5e+03,PPR_1|PF12854.3|0.063,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.0051,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|5e+03,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|0.37,PPR_3|PF13812.2|17,PPR_3|PF13812.2|80,PPR_3|PF13812.2|1e+03 R_Transcript_381593:687-1454(-)
ATGGCTGCAGGCATTATGCCTACTGACGTAACATTCCTAGCCATTTTTCCTGCTATCACGGATCTTGGGGATGTCAAGAATTGCCAGTTGATCCATGCAAATGGATTCAAAAGAGGAATCAATGTGAGTGAGACCCGGGTCACAAACAACCTCATTGATACCTATGCCAAGTGTGGATGTGTTCGAAGTGCATTCCAAGTATTCAAGGAGATGCCTGCTAATAGAAGGGATTTGGTGTCTTGGACGTCAATCATATCTGGATTTGCTATGCATGGTATGGCAAAAGATGCCACAGAGAGTTTCAGGCGGATGGAGAGTTTAGGCTTCAAACCAAACCGAGTTACCTTCTTGAGTGTTCTCAATGCTTGTAGTCATGGAGGATTAGTGGAAGAGGGGTTCCAATTCTTCAGAAGAATGCCTGATTTCCAGATTGTGCCAGAGCTAAAGTATTATGGATGTGTGATTGATATGTTGGGGAGAGCAGGCAGATTGAAAGAAGCAGAGGAGATCGCTTGTCATATCCCTGACCATATTGATAATGTAATAATTTGGCGAACACTTTTGGGTGCTTGTAGCTTGCATGGTGATGCTGAGATTGCTGAGCGTGTAACCAAGAGGTTACAGCAAATGGAGAGTGGATATGGCGGGGACTATGTTTTGATGTCGAACATATTAACAGGTCATGGAAAGTTCAGCGATGCTGAGAATGTGAGGCTGTTGATGGACAATAGGAATGTTCCCAAGATCCCTGCCCACAGCTCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_381593.p1 GENE.R_Transcript_381593~~R_Transcript_381593.p1 ORF type:complete len:293 (-),score=56.89,PPR|PF01535.16|5.8e+03,PPR|PF01535.16|3.9e-05,PPR|PF01535.16|0.00013,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|0.0008,PPR|PF01535.16|0.16,PPR|PF01535.16|3.4,PPR|PF01535.16|3.1e+02,PPR_2|PF13041.2|3.1e-06,PPR_2|PF13041.2|0.0042,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|0.66,PPR_2|PF13041.2|8.1,PPR_2|PF13041.2|86,PPR_2|PF13041.2|1.5e+03,PPR_1|PF12854.3|0.063,PPR_1|PF12854.3|9e+02,PPR_1|PF12854.3|0.0019,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.0051,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|5e+03,PPR_3|PF13812.2|4.6,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|0.0035,PPR_3|PF13812.2|0.37,PPR_3|PF13812.2|17,PPR_3|PF13812.2|80,PPR_3|PF13812.2|1e+03 R_Transcript_381593:687-1454(-)
MAAGIMPTDVTFLAIFPAITDLGDVKNCQLIHANGFKRGINVSETRVTNNLIDTYAKCGCVRSAFQVFKEMPANRRDLVSWTSIISGFAMHGMAKDATESFRRMESLGFKPNRVTFLSVLNACSHGGLVEEGFQFFRRMPDFQIVPELKYYGCVIDMLGRAGRLKEAEEIACHIPDHIDNVIIWRTLLGACSLHGDAEIAERVTKRLQQMESGYGGDYVLMSNILTGHGKFSDAENVRLLMDNRNVPKIPAHSSA*

Click here to download the sequence:
Link to NCBI Protein BLAST