Transcript Information: R_Transcript_381596.p1


Annotated TAIR IDAT1G09220.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2977952-2979466 | Reverse length=504
E-Value9.4E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.055480124482428
Replicate 20.063818542298778
Replicate 30
Condition 2: 8 Hour
Replicate 10.074425121420198
Replicate 20.067966206204212
Replicate 30.11034413750995
Condition 3: 24 Hour
Replicate 10.2093417072435
Replicate 20.067037261065585
Replicate 30.19958393331517


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_381596.p1 GENE.R_Transcript_381596~~R_Transcript_381596.p1 ORF type:5prime_partial len:329 (+),score=54.25,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|0.00047,PPR|PF01535.16|1e-06,PPR|PF01535.16|0.026,PPR|PF01535.16|0.091,PPR|PF01535.16|2.2,PPR|PF01535.16|1e+02,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|12,PPR_2|PF13041.2|8.4,PPR_2|PF13041.2|75,PPR_2|PF13041.2|8.5e+02,PPR_1|PF12854.3|60,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|0.048,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|5.7e+03,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.043,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|16,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|75,PPR_3|PF13812.2|3.4e+03 R_Transcript_381596:1-987(+)
AGTAAAGCACAGAAGGTGTTTGATCAAATGCCTGACAGAAATACGGTTACTTGGAATGTCATGGTTACTGGGTTAGTTAAATGGGGTTACCTCGAGGATGCTCTTGCTTTGTTTTGGGAGATGCCCAGTAGGAATATAGTTTCTTGGACTGGTATGATTGATGGGTGCACACAGTTGAAGAATTATGCTGAGGCATATTCACTGTTTCGGAAGATGGTAATGGTTGCAGGCATTATGCCTACTGACGTAACATTCCTAGCCATTTTTCCTGCTATCACGGATCTTGGGGATGTCAAGAACTGCCAGTTGATCCATGCAAATGGATTCAAAAGAGGAATCAATGTGAGTGAGACCCGGGTCACGAACAACCTCATTGATACCTACACCAAGTGTGGATGTGTTCGAAGTGCATTCCAAGTATTCAAGGAAATGCCTGCTAGTAGAAGAGATTTGGTGTCTTGGACGTCAATCATATCTGGATTTGCTATGCATGGCATGGCAAAAGATGCCACAGAGTGTTTCGGGCGGATGGAGAGTTTAGGCTTCAGACCAAACCGAGTTACTTTCTTGAGTGTTCTCAACGCTTGTAGTCATGGTGGATTAGTGGAAGAGGGGTTTCAATTCTTCAGAAGAATACCTAATTTCCAGGTAGTGCCAGAGCTAAAGCATTATGGATGTGTGATTGATATGTTGGGGAGAGCAGGCAGATTGAAAGAAGCAGAGGAGATCGCTTGTCAGATCCCTGACCATATTGATAATGTAATAATTTGGCGAACACTTTTGGGTGCTTGTAGCTTGCATGGCGATGCTGAGATTGCTGAGCGTGTAACCAAGAGGTTACAGGAAATGGAGAGTGGATATGGCGGGGACTATGTTTTGATGTCGAACATATTAACAGGTCATGGAAAGTTCAGCGAAGCTGAGAATGTGAGGCTGTTGATGGACAATAGGAATGTTCCCAAGATCCCTGCCCACAGCTCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_381596.p1 GENE.R_Transcript_381596~~R_Transcript_381596.p1 ORF type:5prime_partial len:329 (+),score=54.25,PPR|PF01535.16|1.9e+02,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|0.00047,PPR|PF01535.16|1e-06,PPR|PF01535.16|0.026,PPR|PF01535.16|0.091,PPR|PF01535.16|2.2,PPR|PF01535.16|1e+02,PPR_2|PF13041.2|1.9e+02,PPR_2|PF13041.2|1.9e-06,PPR_2|PF13041.2|2.3e-06,PPR_2|PF13041.2|0.015,PPR_2|PF13041.2|1.3e-09,PPR_2|PF13041.2|12,PPR_2|PF13041.2|8.4,PPR_2|PF13041.2|75,PPR_2|PF13041.2|8.5e+02,PPR_1|PF12854.3|60,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|0.048,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|0.33,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|5.7e+03,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.043,PPR_3|PF13812.2|16,PPR_3|PF13812.2|0.56,PPR_3|PF13812.2|0.0037,PPR_3|PF13812.2|16,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|75,PPR_3|PF13812.2|3.4e+03 R_Transcript_381596:1-987(+)
SKAQKVFDQMPDRNTVTWNVMVTGLVKWGYLEDALALFWEMPSRNIVSWTGMIDGCTQLKNYAEAYSLFRKMVMVAGIMPTDVTFLAIFPAITDLGDVKNCQLIHANGFKRGINVSETRVTNNLIDTYTKCGCVRSAFQVFKEMPASRRDLVSWTSIISGFAMHGMAKDATECFGRMESLGFRPNRVTFLSVLNACSHGGLVEEGFQFFRRIPNFQVVPELKHYGCVIDMLGRAGRLKEAEEIACQIPDHIDNVIIWRTLLGACSLHGDAEIAERVTKRLQEMESGYGGDYVLMSNILTGHGKFSEAENVRLLMDNRNVPKIPAHSSA*

Click here to download the sequence:
Link to NCBI Protein BLAST