Transcript Information: R_Transcript_38160.p1


Annotated TAIR IDAT2G17550.1
Annotated Gene Nameunknown protein; Has 264 Blast hits to 258 proteins in 65 species: Archae - 5; Bacteria - 5; Metazoa - 66; Fungi - 16; Plants - 107; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7634495-7637212 | Reverse length=779
E-Value6.1E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.252960954719
Replicate 211.8148673529
Replicate 314.106409028139
Condition 2: 8 Hour
Replicate 111.89708692352
Replicate 215.084120292868
Replicate 318.151610620387
Condition 3: 24 Hour
Replicate 115.590556094746
Replicate 211.463750383803
Replicate 314.047701991139


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38160.p1 GENE.R_Transcript_38160~~R_Transcript_38160.p1 ORF type:complete len:885 (+),score=163.98,DUF4378|PF14309.2|3.9e+03,DUF4378|PF14309.2|4.4e+03,DUF4378|PF14309.2|2.3e-27 R_Transcript_38160:491-3145(+)
ATGGGAGGCTTATCACATTTTTTTGATTTTCATCAAGGACATATGGGGAGAAAGCACAAGAAACAAGGTGGTGCAGGACTTGATGCGCCCCGAAATAGTGTTGATTTACCAGCTGAAACTTGGCATAGTCATTATGCTGTTGGGGAGATAGAACAGGATCTACCGAAGAGGAGCTACTATCCAACTGATGCCTCAGTGAAGAAGTTGATCAGCGGGGAAATCTCAAGACGAAAAAACAAGCAGACTGCACCGAGCATTGTTGCCAAACTGATGGGGATGGACATGTCGCCAGTCGATACAAAACCTGAAGCTCAACCTCTCAGTGGAAGAACTGACAAGATGAGAATAACTACTGACAAAATGATTCAAAGTACAGAAAAGGTATCAGCTCCAAGTGCCCCCAAAAAGTCAAAATCGAGCAAAAATGGTTCTCATAAAGATGCATATTTCCGATACTGGAGCAGTGGCACAAATTCGGGAAGGCCTAGGCCTCGAGTACATCCTCAAGAGAAAGAGCTGCAGAAATTCAAGAAAGAATTCGAAGCATGGCAAGCAGCCAGGTTTCTCGAATGTGCTAGGTTGGTAGAACTTGGAAACATTCCTGAGCAGTGGCTTGCTCAGTTAGACCTTACCAAAGAAAAGATGGCTCTATATGAAACTTCTCGAAAAGAAGTAGTTGAAAAATCAATGGACTGTAAAAGTGACATTTCAAGGTCGAGGTCTCTCTGCGGAAGTGATTTCCAGCATCCTGTCTACAAGAAGGAAGTATTCGTAGATGAGCAAAAGGAATCGTACTCTTTCAGGGATAAAAGCTCAAGAAGAGATTTCAAGCAGCTCTCTATAAAGGAATCTGATCAGAACTCCGATAAATGTTCTGCCCCCACGAGGATAGTAATTTTGAAGCCTGGTCCTGATAGCTTTACCACCAATGATGAGTCTTGGGTGAGTTCTTCGTGTTCTGTGGAAGACAGAGATTGCATAGAAGATCTTCTTGAGGAAGTCAAGGAAAGATTGAAATTCGAAATGCAAGGTAAAACGTTGAAAAAAGGTTCATTGGTTCGAGGTGGTGGGATTGAGACTCCTTTTAAGGAAAAACCCGCACATACAAAACAAGCCTATCAATCTGTTGCTAAACAGGTAAGAGAACATGTCGGAAGGAGGTTGCTTCGGTCGGAATCAGCAAGATCTTATCAAAGTGAAATCCAGTTTAACGAGCTAGCACCATCCTCCCCCGACCTAATGAACAGGGATGCAAGGAAATTCCTGTCAGAGAGGCTGAGAAATGTTCTGATTGGAGATGATCAGAGTAGCATTTCAAACCTTTCTGACGACTATCAAAGTGCGCCCTTATATGATGACGCTAGGACAAGATTAGAAAAGGCTAGGGATATTCTGTATGCTGAAACTGGAAGGAAGTTTAGTCATCATGATAATATGAACTATGAAGCAGATGAACAATCGAGATCCTTCAGGCATGAAATGGAAGATAATCGAATTTTTCCTGAGCAACCGTCTCCTAGAAACCTAGTTCGTTCTTTGTCTGCTCCAGTGTCAGGAACTTCATTTGGCAAGCTTCTTCTGGAGGACCGATACGTTTCATCTGGGGCTCAAATTAAGAGAAAGCACGAGGCTCTTGGAAATTTACCAGTAGATCCCCAAGGCGAGAGGAGAGAAAGGTTTAATTTCCGAGAGAAGGTTTCCAATATCAAATATAGTTTCTCTCTTAGGAAGAAGTTGTTCAGCAGGAAACTCCAGTCAGTTGATTTGCCACATAATAACGAGTTTGATTCAATGAAAGATATAATGAGCGGACCAACTATTCTGGCAAGATTCAGCGACAGGAATGAGAACTTAACTGAGGTGCCACCTAGCCCTGCATCTGTATGCAGCACCCCATGTGAAGAATTCTGGAAGCCAACAGATCATCCCAGCCCAATATCAGCTTCTGATGTGACTTCTGTAGGAGATCATAGCGTTGGCAATGTTTTCAGAGAGATCAGCTCTAATCTTACTGAGTTGCGAAAGCAATTGAACCAACTCGAGTACGAAGGATCAGAGATCACAACTGTCACTGAGGATCCTTCTGAACCAGAGGTAATTGACTTGGAAGATGAAGCAGAAGTCTACATCAGGGACCTTCTCGTCACTTCAGGTTTATACGATGGATCATGGGATAAATCTTTCTCAAGATGGGATCCATACGTGAAGCCATTGAGCAACTGGGTATTTGAAAAGGTGGAAGAATCCTACCAAAAACCAACCAATGAAAACGAAGAACTCTCCAAGGGTTGCGACAGAACAAATTTAGACCACAAGTTGTTATTTGATCTATCGAACGAGGCACTCACAGCTGTACTTGGGCCACCCCGAACCTTGTGTAAGTTCAGGAGAAGGATAACCGATATCAACATGTTGCCCCGGCCTCAAGGCAGAAAGCTATTGGACCGGGTGTGGGAGATGATACAGCAGTATGTATACCCAACAATGGACCCTCAGACTGTCTCTTCTTCACTCGATGATTTGGTGGCTCGTGAATTGGACATAATGCCATGGTCTGATCTAATAGACGAAGACATGAGAGTTCTAGGTAAAGAGCTCGAAAACCTGATTACAAGTGAACTTGTAGAAGAACTTGCGATGGAAATGCAGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38160.p1 GENE.R_Transcript_38160~~R_Transcript_38160.p1 ORF type:complete len:885 (+),score=163.98,DUF4378|PF14309.2|3.9e+03,DUF4378|PF14309.2|4.4e+03,DUF4378|PF14309.2|2.3e-27 R_Transcript_38160:491-3145(+)
MGGLSHFFDFHQGHMGRKHKKQGGAGLDAPRNSVDLPAETWHSHYAVGEIEQDLPKRSYYPTDASVKKLISGEISRRKNKQTAPSIVAKLMGMDMSPVDTKPEAQPLSGRTDKMRITTDKMIQSTEKVSAPSAPKKSKSSKNGSHKDAYFRYWSSGTNSGRPRPRVHPQEKELQKFKKEFEAWQAARFLECARLVELGNIPEQWLAQLDLTKEKMALYETSRKEVVEKSMDCKSDISRSRSLCGSDFQHPVYKKEVFVDEQKESYSFRDKSSRRDFKQLSIKESDQNSDKCSAPTRIVILKPGPDSFTTNDESWVSSSCSVEDRDCIEDLLEEVKERLKFEMQGKTLKKGSLVRGGGIETPFKEKPAHTKQAYQSVAKQVREHVGRRLLRSESARSYQSEIQFNELAPSSPDLMNRDARKFLSERLRNVLIGDDQSSISNLSDDYQSAPLYDDARTRLEKARDILYAETGRKFSHHDNMNYEADEQSRSFRHEMEDNRIFPEQPSPRNLVRSLSAPVSGTSFGKLLLEDRYVSSGAQIKRKHEALGNLPVDPQGERRERFNFREKVSNIKYSFSLRKKLFSRKLQSVDLPHNNEFDSMKDIMSGPTILARFSDRNENLTEVPPSPASVCSTPCEEFWKPTDHPSPISASDVTSVGDHSVGNVFREISSNLTELRKQLNQLEYEGSEITTVTEDPSEPEVIDLEDEAEVYIRDLLVTSGLYDGSWDKSFSRWDPYVKPLSNWVFEKVEESYQKPTNENEELSKGCDRTNLDHKLLFDLSNEALTAVLGPPRTLCKFRRRITDINMLPRPQGRKLLDRVWEMIQQYVYPTMDPQTVSSSLDDLVARELDIMPWSDLIDEDMRVLGKELENLITSELVEELAMEMQL*

Click here to download the sequence:
Link to NCBI Protein BLAST