Transcript Information: R_Transcript_38170.p1


Annotated TAIR IDAT1G15340.1
Annotated Gene Namemethyl-CPG-binding domain 10
Annotated Gene Symbol(s)MBD10
Annotation TypeHomolog
Chromosome Positionchr1:5275895-5277474 | Reverse length=384
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.197203753755
Replicate 230.451294049853
Replicate 332.979890703974
Condition 2: 8 Hour
Replicate 129.351977642892
Replicate 232.193996900312
Replicate 339.757016073406
Condition 3: 24 Hour
Replicate 148.77927328508
Replicate 238.608360172089
Replicate 342.526005512175


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38170.p1 GENE.R_Transcript_38170~~R_Transcript_38170.p1 ORF type:complete len:473 (+),score=160.09,MBD|PF01429.15|3.6e-09,MBD|PF01429.15|7.4e+03 R_Transcript_38170:46-1419(+)
ATGGCGAGTGAGGTCCAAGCAGATAAGGCAGAGATTCAGACCAAAGAAGATGAAACCATTAGTATTGAACTTCCTGCTCCTCAAGGCTGGGCTAAGAAGTTCATTCCTAGAAAAGGTGCTAGTGGAACCCCTAGAAGGAACGAAATTGTGTTCATTGCACCAACAGGTGAAGAGATCAAGAGCAAGAGGCAGTTAGACCACTATCTCAAGTCCCATCCTGGTGGTCCTGCTGCCTCAGAATTTGATTGGGGCACAGGTGATACTCCAAGGCGTTCTGCCAGATTAAGCACCAAATCCAAAGCAACAGATACGCCTGAAAGTGTCTCTTCCAGGAAAAGGCAGAAGAAATCAGGGACGAAGAAGGAAGATGCGAAAAAGGATGGGACTTATGAAGAAGCGGGGTCTGCAGAAGATGAAGCGGCTGCTGGTAAGTCTGAGGATGGTGAAGATGTGGAGATGAAAGATGCAGAAGTGGCAGGGGACCTTTCTAAGGAGGAAAAGGCTGAGAAAGCTGCTGATTCTACTGAACCCTCTGTTAAGAATATAGAGGGAAAAAGTGATGAAGGTCAAGTCACTGAAGCTGCCAGAGCGTCTTCTCTTGATGGACAGGAAGCACAGGTGGAGGAACCTGCATCAGGTAAAGGAGAAGAGCAACCTGAGGAGAACAAATTGGAAACTGGCGACAAACAGACTGAGGCTGAAGTTCCACAACAAACTGTTCCTAGCGGTGGGGAAGAGCAACCAGAGGAAAAGAAACCAGAATCAGGCTCCGATGCTGATTTGCTAATGAAGAACAATGCTACAGAAGAACCAGGGGAAACAAAGGAGGACCATAGGGAAAAAGTGGCTGAACCTCTAGTTACTGAGGAAAAGAAACCGGAAGCAGGCACTGATGCCGAATTGCCAAAAGCAACTAATAACACAACAGAACGACAAGCCGGGAAAACGGAGGAACCTATGGAAAAATCAACTGAGTCTCTAGTTCCCGAGGAAAAGAAACCAGAAACAGGCTCTGATACTGAATTGCCAAAAGAGACTATACATGCAACAGAAGAACAACCAGGGGAAACTAAAGTTGCTGGTGAGAAACCAGCTGAATCTTCGGGTCAACCCGATGTACTTGTCTCTCCAGTGAATACATCAACAGAGGACGTGAATGAAACAACCCCTGCAAATGCTGGAGAAACCGAGGCTAAACAGGGACATGAGAATCCAGAGGAAAAGGTCAGTTCTGAAGTAGTTGGAGTGGATACTAATGGTACCAAGGAGAACCAAGAGACTGCAATGCACACAAAGAATCAACCAGCAAATCATGATGGTACTCCAGATGGTACGGCACATGAGCCCAGTGCCGCGCCGCCGGTTAGTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38170.p1 GENE.R_Transcript_38170~~R_Transcript_38170.p1 ORF type:complete len:473 (+),score=160.09,MBD|PF01429.15|3.6e-09,MBD|PF01429.15|7.4e+03 R_Transcript_38170:46-1419(+)
MASEVQADKAEIQTKEDETISIELPAPQGWAKKFIPRKGASGTPRRNEIVFIAPTGEEIKSKRQLDHYLKSHPGGPAASEFDWGTGDTPRRSARLSTKSKATDTPESVSSRKRQKKSGTKKEDAKKDGTYEEAGSAEDEAAAGKSEDGEDVEMKDAEVAGDLSKEEKAEKAADSTEPSVKNIEGKSDEGQVTEAARASSLDGQEAQVEEPASGKGEEQPEENKLETGDKQTEAEVPQQTVPSGGEEQPEEKKPESGSDADLLMKNNATEEPGETKEDHREKVAEPLVTEEKKPEAGTDAELPKATNNTTERQAGKTEEPMEKSTESLVPEEKKPETGSDTELPKETIHATEEQPGETKVAGEKPAESSGQPDVLVSPVNTSTEDVNETTPANAGETEAKQGHENPEEKVSSEVVGVDTNGTKENQETAMHTKNQPANHDGTPDGTAHEPSAAPPVSC*

Click here to download the sequence:
Link to NCBI Protein BLAST