Transcript Information: R_Transcript_38190.p2


Annotated TAIR IDAT1G47530.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17451724-17454110 | Forward length=484
E-Value1.1E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0786978570591
Replicate 28.6843336800395
Replicate 311.513334079741
Condition 2: 8 Hour
Replicate 19.486670188985
Replicate 212.877994777646
Replicate 311.594222490509
Condition 3: 24 Hour
Replicate 115.38533678087
Replicate 210.623475486561
Replicate 310.428173437213


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38190.p2 GENE.R_Transcript_38190~~R_Transcript_38190.p2 ORF type:complete len:191 (+),score=19.01,MatE|PF01554.14|2.1e-18 R_Transcript_38190:2154-2726(+)
ATGAGTGGTTTGATGTTTGCATTTTGCAGCTTGGAGTTCTGGTACTTGATGGTGCTAGTAGTGATTACAGGTCGTCTGCCCAACCCTTTGATACCTGTTGATGCTATCTCCATTTGCATGAACCTACAAGGATGGGATGCCATGATTGCAATCGGTTTCAATGCTGCTATCAGTGTGAGAGTATCAAATGAACTCGGAGCTGGCAATTACCGGCAAGCAAAGATTTCTGTGATAGTCGTTTCCGTGACTTCTGTGGCCATTGGTTTTGTTGCCTTCTTAGTCGTTCTTTCCAGTAGAGATTGGTTCCCTTTCCTTTTCACACAAAGTGTACCTGTTGCGGTGGAAACTACAAGGCTTTCAATCTTGTTGGCATTCACAGTTCTTCTCAACAGCCTTCAACCTGTTCTATCAGGCAAATGCACTGAAGTTCAGAAGTTCCATTTATATTCTGTGATTTGTTCTTATATGTTTGAAAGCCTACATTCAATATTTCTTATCTCTCTTTTCCCATACTGTGGTCCCTGCAGGAGTTGCTATTGGAGCAGGATGGCAGGCGCTTGTTGCATATATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38190.p2 GENE.R_Transcript_38190~~R_Transcript_38190.p2 ORF type:complete len:191 (+),score=19.01,MatE|PF01554.14|2.1e-18 R_Transcript_38190:2154-2726(+)
MSGLMFAFCSLEFWYLMVLVVITGRLPNPLIPVDAISICMNLQGWDAMIAIGFNAAISVRVSNELGAGNYRQAKISVIVVSVTSVAIGFVAFLVVLSSRDWFPFLFTQSVPVAVETTRLSILLAFTVLLNSLQPVLSGKCTEVQKFHLYSVICSYMFESLHSIFLISLFPYCGPCRSCYWSRMAGACCIY*

Click here to download the sequence:
Link to NCBI Protein BLAST