Transcript Information: R_Transcript_38193.p1


Annotated TAIR IDAT1G47530.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17451724-17454110 | Forward length=484
E-Value2.1E-256
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 180.57378478583
Replicate 247.905844623309
Replicate 368.533219012162
Condition 2: 8 Hour
Replicate 167.461056487308
Replicate 288.759010573686
Replicate 3137.50771147526
Condition 3: 24 Hour
Replicate 184.990739410317
Replicate 277.553491976459
Replicate 394.117130153658


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38193.p1 GENE.R_Transcript_38193~~R_Transcript_38193.p1 ORF type:complete len:490 (+),score=90.26,MatE|PF01554.14|5.3e-34,MatE|PF01554.14|1.1e+03,MatE|PF01554.14|9.3e-24 R_Transcript_38193:463-1932(+)
ATGGAGGATGGAAAGTCTCTATTAAAAGAAGAAGAAGAGGAGGAGGAGAATCAGCTGCTGATTAATACTAAGCAACCAGTACAACAGCTTAGCCCAGCAAAAGAGTTCAGCGATGAGTCAAGGAAATTATGGCATATTGCTGGACCAGCAATCTTCACAGCAGTTTGCCAGTACTCTCTTGGGGCTTTGACTCAGACCTTTGCTGGTCTTGTCGGTGATCTTGAACTTGCTGCTGTCTCCGTTGAGAATTCCGTCATTGCTGGCCTTGGCTTTGGCGTTATGCTAGGAATGGGTAGTGCGTTGGAAACACTTTGTGGCCAAGCATATGGTGCTGGCAAACTCAGGATGTTGGGGATATACATGCAGAGATCATGGGTTATCTTGCTACTCACGGCCTGTCTCCTAACCCCAATATATGTATATTCTCCATGGATTCTCCAACTTTTCGGGACATCTGAAGAAATCTCTCAAGCTGCAGGAAAATTTGCTGTGTGGATGCTCCCTCAACTCTTTGCCTATGCTTTGAATTTCCCTATACAAAAATTCTTGCAATCGCAGCGGAAAGTGTTTGTGATGGCCTTGGTCTCTGCCATAGTGCTGGTGATACACACAGTGTTGAGCTGGGTGTTTATGCTTAAGCTTGGATGGGGCTTGGCAGGAGCAGCCATCATGCTTAACACCTCTTGGTGGCTTATTATCATTCTGCAACTTCTCTATATTTTCATCACAAAGTCGGATGGTGCTTGGTGTGGATTTTCGTGGCTGGCATTCAGTGACTTGTGGGGCTTTGTGCAGCTCTCGCTGGCATCTGCTGTAATGTTGTGCTTGGAGTTCTGGTACTTGATGGTGCTAGTAGTGATTACAGGTCGTCTGCCCAACCCTTTGATACCTGTTGATGCTATCTCCATTTGCATGAACCTACAAGGATGGGATGCCATGATTGCAATCGGTTTCAATGCTGCTATCAGTGTGAGAGTATCAAATGAACTCGGAGCTGGCAATTACCGGCAAGCAAAGATTTCTGTGATAGTCGTTTCCGTGACTTCTGTGGCCATTGGTTTTGTTGCCTTCTTAGTCGTTCTTTCCAGTAGAGATTGGTTCCCTTTCCTTTTCACACAAAGTGTACCTGTTGCGGTGGAAACTACAAGGCTTTCAATCTTGTTGGCATTCACAGTTCTTCTCAACAGCCTTCAACCTGTTCTATCAGGAGTTGCTATTGGAGCAGGATGGCAGGCGCTTGTTGCATATATTAATATTGCTTGCTACTATTTATTTGGATTGCCTGCCGGAATTTTTCTTGGATTTAAATTTGGGCTTGGAGCTATGGGAATTTGGGGAGGGATGATTGGTGGAATCTGTTTGCAGACGATTATTTTGATTGTAATGACATCTCTCACAAATTGGAAAAAGGAAGCGGATGAAGCAGAGAGTAGGGTACGGAAATGGGGAGGAACAGCTGCTGCTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38193.p1 GENE.R_Transcript_38193~~R_Transcript_38193.p1 ORF type:complete len:490 (+),score=90.26,MatE|PF01554.14|5.3e-34,MatE|PF01554.14|1.1e+03,MatE|PF01554.14|9.3e-24 R_Transcript_38193:463-1932(+)
MEDGKSLLKEEEEEEENQLLINTKQPVQQLSPAKEFSDESRKLWHIAGPAIFTAVCQYSLGALTQTFAGLVGDLELAAVSVENSVIAGLGFGVMLGMGSALETLCGQAYGAGKLRMLGIYMQRSWVILLLTACLLTPIYVYSPWILQLFGTSEEISQAAGKFAVWMLPQLFAYALNFPIQKFLQSQRKVFVMALVSAIVLVIHTVLSWVFMLKLGWGLAGAAIMLNTSWWLIIILQLLYIFITKSDGAWCGFSWLAFSDLWGFVQLSLASAVMLCLEFWYLMVLVVITGRLPNPLIPVDAISICMNLQGWDAMIAIGFNAAISVRVSNELGAGNYRQAKISVIVVSVTSVAIGFVAFLVVLSSRDWFPFLFTQSVPVAVETTRLSILLAFTVLLNSLQPVLSGVAIGAGWQALVAYINIACYYLFGLPAGIFLGFKFGLGAMGIWGGMIGGICLQTIILIVMTSLTNWKKEADEAESRVRKWGGTAAAD*

Click here to download the sequence:
Link to NCBI Protein BLAST