Transcript Information: R_Transcript_38194.p1


Annotated TAIR IDAT5G01980.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:375542-377023 | Forward length=493
E-Value3.5E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.567498798513
Replicate 216.494390957668
Replicate 321.627262162854
Condition 2: 8 Hour
Replicate 116.853334071798
Replicate 220.06435884128
Replicate 320.866175812265
Condition 3: 24 Hour
Replicate 123.991942688411
Replicate 217.92238154892
Replicate 323.465196916584


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38194.p1 GENE.R_Transcript_38194~~R_Transcript_38194.p1 ORF type:complete len:555 (+),score=125.68,zf-RING_2|PF13639.2|4.2e+02,zf-RING_2|PF13639.2|8.3e-10 R_Transcript_38194:323-1987(+)
ATGGATGTGGAAACACAGAGTGTTCTGCAGCAATCGCCACAGTCAAGTTTGCTTGATCACATTAATAATGGTTTCACAGTTGATCATCTAGACATGCCTGTGGCATGTGCTCTATGCCGTAAAACTCTTTCAGCAGATGTTGAGGTTGACAACGGTCTCCAAGCTGTCAGCGTATGTGGTGACTGTAAATTTCTAATGCTTGAAGATCTTGGGACCCCGGCACGTGAATCTCACCGTAGAAGCTCACGTAGAAGAAGAATAAGGAGGAGTTCAATGTATGGTAGTTCGGAGTCAATTGAGAATCTTTTCTCACAACAGTTTTCTCAAATGATTAATTTAGCCAGGCACATTGACCCTGAACATGAAGTTCCTCCTGGAGATATTGATTCTAATTTTAGGTTACAGCAGCCAGCAAGCTCGCATACTACACCAAATGGTTCTAGAAGATGGCGGAGAATAATTTCTGATACTGAAAGTGACGGCTTCAACTCAGACTCTTTTTATGGGGAAACTGAATCAAATGTTAGCTTAGGTGGTGGATACAGGGTTTCTCATGGTGACAGTGACGCCCTATCTTTTAGTGCTTATGGAGGTGACTCAGATGCTTCTGTTGATGGCCATACTCTCTTTGATACGGACATATTTGTCCAGTCCATGATGAGAAGTGAAATTGACACTGACTCTGATATTGATCCAATGCATGCTGGTTCTGTACAGTGGAATTCTGATGATCGCGAAGCAGTAGAAAATGATAATGAGTGGGAAGAAGTTGACGCCGAGGAACATGAAGCTCGGTCTCCTGAAGTTGGAGCTTATGCTGACACAAGTGGAGGTAGTGATACTTTATTTAGACTTAGACGAACAACAGATTCTTCTGAATTTGAAGGACTTGTTCATTGGAGAGTCAGGGAAGGTAGGCACCTTGAGTTTCCAAGCAATTTTACAAGCATGGAAGAGGCCAATGATACACGCTATCTTGGTAACCCTGGGGACTACCTTGATGCTCGAGAATTTGAAGAATTTCTGGAGCATCTTGCTGAGGCTGACAATTCAAGACGAGGAGCACCTCCTGCTGCTGTGTCCTTTGTTAATAATCTGCCCATTGTAGTCATCAATGAGGAGCATCAGAAACCTGATGGTGTAGCATGTGCAGTCTGCAAAGATCTATTGACAATTGGCTCTGAAGCTTACCAATTGCCCTGCCTTCATCTCTATCATCCATCCTGCATCTTGCCATGGCTGAGTACACGTAACTCCTGTCCACTTTGTCGTTTTGAACTTCCAACTGATGACATAGATTATGAGGAGGGCAAGCACAATGCTCGGAGTAGAATGGTTATTACTGAAATTCAACAGCAGGATGGTAGGGATGATAGCTCCTCTATTGTTACTGATGTAAGTGAATTAGTCGAGACCCAAGAACTTGGGGAGTTGTTGGGAGATGTAGGCCCCACGGAAGATGTATCACGCACAAGTGGTGGGAGGGGAAGATGGTTGTTTTTGGCAGCGGCCCCTATAGTTGGCCTCATGGGTATAGCCATCGTGCTCTGGTTGGGGAATCCTCTCACAGGAGGAAGATGTCAGATCGTGGAGCGTTCTCAACATATATATAATTCTGACTCAGGCCCGCGCAACCAGCGGGCTAGAAGGTGGTGGTGGTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38194.p1 GENE.R_Transcript_38194~~R_Transcript_38194.p1 ORF type:complete len:555 (+),score=125.68,zf-RING_2|PF13639.2|4.2e+02,zf-RING_2|PF13639.2|8.3e-10 R_Transcript_38194:323-1987(+)
MDVETQSVLQQSPQSSLLDHINNGFTVDHLDMPVACALCRKTLSADVEVDNGLQAVSVCGDCKFLMLEDLGTPARESHRRSSRRRRIRRSSMYGSSESIENLFSQQFSQMINLARHIDPEHEVPPGDIDSNFRLQQPASSHTTPNGSRRWRRIISDTESDGFNSDSFYGETESNVSLGGGYRVSHGDSDALSFSAYGGDSDASVDGHTLFDTDIFVQSMMRSEIDTDSDIDPMHAGSVQWNSDDREAVENDNEWEEVDAEEHEARSPEVGAYADTSGGSDTLFRLRRTTDSSEFEGLVHWRVREGRHLEFPSNFTSMEEANDTRYLGNPGDYLDAREFEEFLEHLAEADNSRRGAPPAAVSFVNNLPIVVINEEHQKPDGVACAVCKDLLTIGSEAYQLPCLHLYHPSCILPWLSTRNSCPLCRFELPTDDIDYEEGKHNARSRMVITEIQQQDGRDDSSSIVTDVSELVETQELGELLGDVGPTEDVSRTSGGRGRWLFLAAAPIVGLMGIAIVLWLGNPLTGGRCQIVERSQHIYNSDSGPRNQRARRWWWF*

Click here to download the sequence:
Link to NCBI Protein BLAST