Transcript Information: R_Transcript_382063.p1


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81486432833566
Replicate 20.37493393600532
Replicate 31.6361955425823
Condition 2: 8 Hour
Replicate 10.87449517668733
Replicate 20.39930146144974
Replicate 30.64827180787096
Condition 3: 24 Hour
Replicate 11.0249021083796
Replicate 20.59076586314046
Replicate 31.1725556082266


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_382063.p1 GENE.R_Transcript_382063~~R_Transcript_382063.p1 ORF type:complete len:112 (+),score=12.97,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|8.5e-10,zf-RING_11|PF17123.1|2.7e+03,zf-rbx1|PF12678.3|2.5e-09,zf-C3HC4|PF00097.21|6.3e-08,zf-C3HC4_2|PF13923.2|2.7e+03,zf-C3HC4_2|PF13923.2|1.2e-07,zf-C3HC4_3|PF13920.2|2.1e+03,zf-C3HC4_3|PF13920.2|6.2e-06 R_Transcript_382063:561-896(+)
ATGGTCAAAGAAGAAGAAGAACTGAACGTCAAACCCTCGTGTTTCGAATCACCACGCAACTCCATCCAGCCACATCCATCTCTATCGGCCTTGATCAGGGAACCATCGATTCGCTCCCTGAGTATTGTCATCGGTGAGAGTGGAAGAATTATTAAGCAAGATGATAATACATGCTCCATTTGCTTGGGTGAGTATCATCCAAAGGAGAAGTTGAAGATTTTGCCACAATGCTTGCATAGATTTCATTCTGACTGTGTTGACCAATGGCTTCGCTCCAATGGAAGTTGCCCCATTTGTAGACTTCCCCCACCTGTAGCTCGTACCAATTCTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_382063.p1 GENE.R_Transcript_382063~~R_Transcript_382063.p1 ORF type:complete len:112 (+),score=12.97,zf-RING_2|PF13639.2|1.3e-13,zf-RING_11|PF17123.1|8.5e-10,zf-RING_11|PF17123.1|2.7e+03,zf-rbx1|PF12678.3|2.5e-09,zf-C3HC4|PF00097.21|6.3e-08,zf-C3HC4_2|PF13923.2|2.7e+03,zf-C3HC4_2|PF13923.2|1.2e-07,zf-C3HC4_3|PF13920.2|2.1e+03,zf-C3HC4_3|PF13920.2|6.2e-06 R_Transcript_382063:561-896(+)
MVKEEEELNVKPSCFESPRNSIQPHPSLSALIREPSIRSLSIVIGESGRIIKQDDNTCSICLGEYHPKEKLKILPQCLHRFHSDCVDQWLRSNGSCPICRLPPPVARTNSS*

Click here to download the sequence:
Link to NCBI Protein BLAST