Transcript Information: R_Transcript_382087.p1


Annotated TAIR IDAT5G63380.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25387581-25390026 | Reverse length=562
E-Value4.4E-209
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5178433840003
Replicate 21.7942293083018
Replicate 31.9991334629369
Condition 2: 8 Hour
Replicate 13.5615803559629
Replicate 22.1954320353164
Replicate 32.673237200457
Condition 3: 24 Hour
Replicate 15.3011663962153
Replicate 23.8095447174633
Replicate 34.5367242441933


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_382087.p1 GENE.R_Transcript_382087~~R_Transcript_382087.p1 ORF type:complete len:550 (+),score=57.34,AMP-binding|PF00501.24|3.9e-91,AMP-binding_C|PF13193.2|1.5e+04,AMP-binding_C|PF13193.2|5.1e-15 R_Transcript_382087:226-1875(+)
ATGGATCCTCGAAGTGGCTACTGTTCTTCAACAAAAACCTTCTACAGTCTTCGCCCAAACAACCGTATCCCACCGGAACACCTCCCTCTCTCCATCCTTAACTACGTTTTCTCTCTCCTCCACTCTAACCCAAGATTCTCCCCTTCCACCCCCGTCGTCATTGATTCCACCACTGACGTCACCCTCACTTACTCCGAGTTCCTCAACCGAGTCAACTCACTCTCCGTCTCTCTCTCCCGCTCCCTCCCCTCCCCATCCTCCTCCGCCCGCCACGTGGCCCTCATTCTCTCTCCTCCCTCCCTTCACATTCCCGTCCTCTACTTCTCCCTCCTCTCCCTCAACGTCGTCGTTTCCCCCGCCAACCCGCTCTCGACTCGCTCCGAGTTGACTCACCTCATCGACCTCTCCAAACCCTCCCTCGTCTTCACCACCACCTCCTTATCCCCTAAGCTCGCCTCCTTTAACCTCCCTACCATCCTCCTCGACTCGCCCGAGTTCGACTCGCTCCTGACTCGCCGAGTCGACTCCGATTCCGTCCCCCGAGTCGCCGTCTCCGACTCCGACGTCGCCGCGATTCTCTACTCTTCTGGTACCACCGGCCGAGTCAAGGGCGTCGAGTTGACTCACCGCAATTTCATTGCCCTAATTTCCGGATTCCCTTCCAGAATCGATGACGGAGAGTCTCAAAAACCTCCAGTCTCTCTCTTCACTCTGCCTTTATTCCACGTCTTCGGATTCTTCATGCTCTTGAGAGTCGTTTCGTTGGCTGAGACCGTCGTTTTGATGGAACGATTCGATTTCGAGAAGATGTTAGCTGCGATTCAAAAGTACAAGGTTACGTACATGCCGGTTTCACCGCCATTGGTGGTTGCTTTGGAGAAATCGGAGCTTACATATAATTATGATCTGAGTTCCCTTGAAGTTCTTGCTTGTGGTGCTGCTCCTCTCAGTAAAGAGGTTGCTGAGCGCTTTAGACAACGGTTTCCTCATGTGGATATTGTTCAGGGATACGGCTTGACTGAGACTTTAGGTAGGGTTGCAAGTACAGTTGAACCTGAGGAATATGGACAATATGGTTCTGTTGGCCGCCTTTCAGAACATATGGAAGCTAAGATTGTTGATCTATCAACAGGGGAGGCCTTACCACCTGGTCAACAGGGTGAGCTGTGGGTGCGTGGGCCAACCATTATGAAGGGCTATGTGGGAGATGAAGAAGCTACTGCGGCGACAATCCATCCAGATGGATGGTTGAAAACTGGTGATCTGTGTTATTTTGACAATGAGGGGTTCCTTTATATTGTTGATCGGTTAAAGGAATTGATCAAGTACAAGGGATATCAGGTTCCGCCAGCTGAGTTAGAACATGTGCTACTATCCCATCCAGAAATTGCTGATACTGCTGTTATTCCTTACCCTGATGAAGAAGCAGGACAAATACCCATGGGATTTGTTGTCAGGAAACCAGGGAGCATCATTACGGAGTCAGAAGTGATGGAATATGTAGCTAAACAGGTTTCTCCATACAAGAGGATACGACGTGTTTCATTTGTTACCAGTATCCCCAAAACCCCTCTGGAAAGATCCTTAGGAGAGAGCTTGCAAATCAAGTTATTTCTAGTCCATCCAAGTTGTAATACCAAGAGAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_382087.p1 GENE.R_Transcript_382087~~R_Transcript_382087.p1 ORF type:complete len:550 (+),score=57.34,AMP-binding|PF00501.24|3.9e-91,AMP-binding_C|PF13193.2|1.5e+04,AMP-binding_C|PF13193.2|5.1e-15 R_Transcript_382087:226-1875(+)
MDPRSGYCSSTKTFYSLRPNNRIPPEHLPLSILNYVFSLLHSNPRFSPSTPVVIDSTTDVTLTYSEFLNRVNSLSVSLSRSLPSPSSSARHVALILSPPSLHIPVLYFSLLSLNVVVSPANPLSTRSELTHLIDLSKPSLVFTTTSLSPKLASFNLPTILLDSPEFDSLLTRRVDSDSVPRVAVSDSDVAAILYSSGTTGRVKGVELTHRNFIALISGFPSRIDDGESQKPPVSLFTLPLFHVFGFFMLLRVVSLAETVVLMERFDFEKMLAAIQKYKVTYMPVSPPLVVALEKSELTYNYDLSSLEVLACGAAPLSKEVAERFRQRFPHVDIVQGYGLTETLGRVASTVEPEEYGQYGSVGRLSEHMEAKIVDLSTGEALPPGQQGELWVRGPTIMKGYVGDEEATAATIHPDGWLKTGDLCYFDNEGFLYIVDRLKELIKYKGYQVPPAELEHVLLSHPEIADTAVIPYPDEEAGQIPMGFVVRKPGSIITESEVMEYVAKQVSPYKRIRRVSFVTSIPKTPLERSLGESLQIKLFLVHPSCNTKRV*

Click here to download the sequence:
Link to NCBI Protein BLAST