Transcript Information: R_Transcript_38220.p1


Annotated TAIR IDAT5G49710.3
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24590.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20195561-20197188 | Forward length=235
E-Value3E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.679611308486
Replicate 225.178490336618
Replicate 333.24270456027
Condition 2: 8 Hour
Replicate 127.17333792926
Replicate 229.269121759601
Replicate 328.334221456214
Condition 3: 24 Hour
Replicate 125.570890977199
Replicate 222.682847558195
Replicate 325.891553105232


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38220.p1 GENE.R_Transcript_38220~~R_Transcript_38220.p1 ORF type:complete len:246 (+),score=49.83 R_Transcript_38220:181-918(+)
ATGGAGATGGGACAAGGGAGTGAATCGACTTCACCGCAAATTGAGAGGAGAGAGAAAGAGAAAGAGCAACTCAGAGTTAAAAGGAAGACTCTAAAGGCTGTGCTTGAGCAGTGCCAAAGAGCTCTCGAATCCCTAGATGTCGATTCTTCCGAACAAGACGATGATGACGATAATATTACCGATGACGACGTCGATCGCCAGGGAGTTGACGACAGAGAGTCTTGTGATGGATCGTCTTCTCCCTGTACAGATCGTGAGGCCGAACAACTGTGTGTTATGATCAAATCTAGGGTGGACGGGCCGGAATTCATTGAAAAGTTGGAAACTGCTCGAATTTCCGCTCAACGGACTGTTCCCGAAGAGGGCGGTTCTTGGGACGTGGTGAGCCATAGTGATTTATGGGAAGGTGGGAGTGTTGATATGGATGAAGAAGACTATATTGTTGTTCAACAAGAGGATATCATGGATGGGATTGCCTGCTTTATGGCTGCCTATCTATTGTCTCTTAAACAGACTAAGGACCTGACTCCTAACCAGCTTCAGGAAGCTCTTAGCAAAACTTTTTCTGTAAAGAAGAAGAAAGGAAAGCTACGGAAAGCATTGGATGGTAGTAAAGTCATTTATAATGTTGCGTCCTGGAGTGCAACTGCAATTGGGATTTACCAAAATCCTGCACTTCTTAGAGCTGCTACGACAGCCTTCTGGACCTCATGCCGTGTCATATCAAGGCTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38220.p1 GENE.R_Transcript_38220~~R_Transcript_38220.p1 ORF type:complete len:246 (+),score=49.83 R_Transcript_38220:181-918(+)
MEMGQGSESTSPQIERREKEKEQLRVKRKTLKAVLEQCQRALESLDVDSSEQDDDDDNITDDDVDRQGVDDRESCDGSSSPCTDREAEQLCVMIKSRVDGPEFIEKLETARISAQRTVPEEGGSWDVVSHSDLWEGGSVDMDEEDYIVVQQEDIMDGIACFMAAYLLSLKQTKDLTPNQLQEALSKTFSVKKKKGKLRKALDGSKVIYNVASWSATAIGIYQNPALLRAATTAFWTSCRVISRLF*

Click here to download the sequence:
Link to NCBI Protein BLAST