Transcript Information: R_Transcript_38232.p1


Annotated TAIR IDAT1G30680.1
Annotated Gene Nametoprim domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10881665-10886060 | Forward length=709
E-Value1.7E-307
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2232689677832
Replicate 26.2027475380496
Replicate 37.9513786338195
Condition 2: 8 Hour
Replicate 16.7272834271604
Replicate 25.9783155291796
Replicate 38.2312325856112
Condition 3: 24 Hour
Replicate 110.071593421903
Replicate 27.5255019257361
Replicate 310.475061031839


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38232.p1 GENE.R_Transcript_38232~~R_Transcript_38232.p1 ORF type:complete len:677 (+),score=121.32,Toprim_4|PF13662.2|1.7e-18,AAA_25|PF13481.2|1.1e-10,DnaB_C|PF03796.11|8.1e-08,Toprim_2|PF13155.2|8.1e-06,Toprim|PF01751.18|2.5e-05 R_Transcript_38232:272-2302(+)
ATGTTTGTTTCGTCAAGCTGTTTATCATCTATGGGTCGTCTTTGTTGCCGGCGTTTCTGTACTTCCTTTCTTGGCGTTTCGTGTTTCTTAGACGTTTCTTCACGTACTCGTACTCGAAACGCCACCACCACCTGCCTGCCGTTTCCTCCTAACTTTGCTCGTCTCAAGGCTTCTTCCTTTTCTCATGCTGCTCGTCCCACCATTCCTCCTGCTGTGTCTTTGGAGGGTTCCACTCTTCGTTCATCAAGAATAAATGTGTTGATGAAAAAGTTGAAAGAATTGGGGTTTGAAGATCATGAGTATATGCCAGGCCAATACAATCATTTGTTATGCCCTATGTGTAAAGGTGGCGATTCTGGTGAAAATTCCTTAGCGTTGCACATCAGTGACGATGGAAACACCGCGGTGTGGCTCTGTTTCCGTGGCAAATGTGGTTGGCAGGGAAGTACAATGGCCTTTGCTGATGTTCATTCATCGTATGGGAAGTTGAACCAATCTATAAAAACTAAAAAAAGAGAACTAACTGAGAAGAGTCTTCAGCTTGAACCGCTTTGTAACGAGCTAATAGCATATTTTGCGGAGAGAATGATATCTGTGGAGACATTGAGGAGGAATTATGTTATGCAGAAAACGTTTGGCGGTCAGATTGCGATTGCATTTACTTATAGGAAAAACGAAGCACTAGTTAGCTGTAAATACCGAGATGTCACTAAGAAATTTTGGCAGGAAGCAGATACTGAAAAGATATTTTATGGGCTTGATGATATTAAGAATGCCAGTGACATCATCATTGTTGAAGGAGAGATCGACAAGCTTGCTATGGAAGAAGCTGGCTTTCGCAATTGTGTTAGCGTGCCTGATGGTGCACCCCCTAAGGTGTCTAATAAAGATCTTCCAGCTCCAGATCAGGACACAAAGTATCAGTATTTGTGGAATTGTAAGGAGTACTTTGAAAAGGCATCTAGGATAATTTTAGCAACTGATGGGGATCCTCCTGGTCAAGCATTGGCTGAAGAGCTTGCTCGACGCCTTGGGAGAGAGAGATGTTGGCGAGTTAAGTGGCCCAAAAAAAATGAGGTTGATTATTTCAAGGATGCAAATGAGGTACTCATGTATTTGGGGCCAGGGATACTGAAGCAAACAATTGAGAGTGCTGAGTTGTATCCTATTCGCGGCTTGTTTAATTTTAAAGACTATTTCCATGAGATTGATGCCTATTATAACAAGGTTCTTGGTGATGAACTTGGTGTTTCTACTGGTTGGAGGTGCTTGGATGAGCTCTACAATGTTGTTCCTGGTGAACTGACCATAGTAACCGGTGTTCCCAATTCTGGAAAGAGTGAATGGATTGATGCTCTACTATGCAACCTAAATCACAGTGTTGGCTGGAAGTTTGCACTCTGTTCCATGGAAAACAAGGTCCGCGAACATGCAAGGAAACTTTTGGAGAAGCATGTGAAGAAACCATTTTTTAAGTCTCGGTATGGAGAGTCTCTTGATCGAATGACTTTGGAAGAGTTGGATCTAGGAAAGAAATGGTTGGATAGTACATTTCATCTTATACGGTGTGAGAATGATTGCCTTCCTAGCATCAAATGGGTTCTTGATCTTGCAAAAGCTGCAGTTTTAAGACATGGAGTGCGTGGTCTTGTGATTGACCCATACAATGAGCTTGACCATCAACGCCCTACCAGCATGACAGAAACAGAGTATGTTAGCCAGATGCTCACAATGATTAAGCGATTCGCTCAACATCATTCTTGCCACGTTTGGTTTGTGGCTCATCCAAGACAGCTGCAAAATTGGGCTGGAGATCCTCCTAATCTCTATGACATTAGCGGGAGTGCACATTTCGTAAACAAATGTGACAATGGAATTGTTGTACATCGTAACAGGGACCCAGATGCTGGGCCACTTGATAGAGTGCAGATTTGTGTACGGAAGGTACGAAATAAGGTTGCTGGTACAATTGGTGATGCTTTTTTGACATATAATAGGGTAACTGGCGAATTCGTGGACATGAAGAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38232.p1 GENE.R_Transcript_38232~~R_Transcript_38232.p1 ORF type:complete len:677 (+),score=121.32,Toprim_4|PF13662.2|1.7e-18,AAA_25|PF13481.2|1.1e-10,DnaB_C|PF03796.11|8.1e-08,Toprim_2|PF13155.2|8.1e-06,Toprim|PF01751.18|2.5e-05 R_Transcript_38232:272-2302(+)
MFVSSSCLSSMGRLCCRRFCTSFLGVSCFLDVSSRTRTRNATTTCLPFPPNFARLKASSFSHAARPTIPPAVSLEGSTLRSSRINVLMKKLKELGFEDHEYMPGQYNHLLCPMCKGGDSGENSLALHISDDGNTAVWLCFRGKCGWQGSTMAFADVHSSYGKLNQSIKTKKRELTEKSLQLEPLCNELIAYFAERMISVETLRRNYVMQKTFGGQIAIAFTYRKNEALVSCKYRDVTKKFWQEADTEKIFYGLDDIKNASDIIIVEGEIDKLAMEEAGFRNCVSVPDGAPPKVSNKDLPAPDQDTKYQYLWNCKEYFEKASRIILATDGDPPGQALAEELARRLGRERCWRVKWPKKNEVDYFKDANEVLMYLGPGILKQTIESAELYPIRGLFNFKDYFHEIDAYYNKVLGDELGVSTGWRCLDELYNVVPGELTIVTGVPNSGKSEWIDALLCNLNHSVGWKFALCSMENKVREHARKLLEKHVKKPFFKSRYGESLDRMTLEELDLGKKWLDSTFHLIRCENDCLPSIKWVLDLAKAAVLRHGVRGLVIDPYNELDHQRPTSMTETEYVSQMLTMIKRFAQHHSCHVWFVAHPRQLQNWAGDPPNLYDISGSAHFVNKCDNGIVVHRNRDPDAGPLDRVQICVRKVRNKVAGTIGDAFLTYNRVTGEFVDMKS*

Click here to download the sequence:
Link to NCBI Protein BLAST