Transcript Information: R_Transcript_38266.p1


Annotated TAIR IDAT2G16780.1
Annotated Gene NameTransducin family protein / WD-40 repeat family protein
Annotated Gene Symbol(s)MSI2, MSI02, NFC02, NFC2
Annotation TypeOrtholog
Chromosome Positionchr2:7281615-7283583 | Reverse length=415
E-Value8.2E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.928577645663
Replicate 239.489392267149
Replicate 335.446922411564
Condition 2: 8 Hour
Replicate 124.485864947245
Replicate 226.169304539198
Replicate 335.154944169898
Condition 3: 24 Hour
Replicate 150.04913692463
Replicate 245.881377984048
Replicate 352.881972637686


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38266.p1 GENE.R_Transcript_38266~~R_Transcript_38266.p1 ORF type:complete len:411 (+),score=98.31,CAF1C_H4-bd|PF12265.4|8.8e-24,CAF1C_H4-bd|PF12265.4|1.5e+04,WD40|PF00400.28|0.45,WD40|PF00400.28|0.43,WD40|PF00400.28|0.57,WD40|PF00400.28|0.0068,WD40|PF00400.28|0.38 R_Transcript_38266:56-1234(+)
ATGGCGGACGAAGGAGAAGCACCCCCAACGGAGGAGCAACTGATAGAAGAGTTTGCGGTTTGGAAGAAAAACACTCCAGTGCTCTACGACGTCGTTATATGTCATCTCCTTGAATGGCCATCTCTTACTGTTCAATGGCTTCCAACTCCACCTCAGATCAACCCTGATACTTCTCTCGCAGTTCACAGCCTCCTTCTCGGGACCCACACCTCCGATGACACCCCTAACTACCTCATGGTTGCCGATGTCCACCTTCCCTCCGACAGCGGTCCTTGTCCCTCACTGCCCAAGGTGGAGATAACAAAGAAGTTTGAAGTTGATGGTGAGGTGAACAGAGCAAGATGTATGCCTCAAAACCCTAATCTCATTGCTGCTAAAACTTGTGGGGTTGAGGTTTATGTATTTGATACTGCTAAGGAGGTTAGCTCTGGGTGTAATCCTGATTTGAGATTGACAGGTCATGAGAAAGAAGGTTATGGTCTTTCTTGGAACCCCTTTAAGGAGGGTTATCTTTTGAGTGGTTCAAATGATTGTAATATTTGTTTGTGGGATGTTTCTTCCATGCCTCAAAGTGGAGTTCTTGATGCTAGGAATTTTTACAAGGCTCATGAGAACATAGTTGAACATGTTGCATGGCATACCAAGAATGAAAATTTATTCGGTTCAGTGGGTGATGATGGACGGTTGATGATTTGGGACCTGCGGTCTGATAAGCCTGAGCATTCGGTTGTAGCTCATGAGAAAGAGGTGAACTATCTGTCTTTCAGCTCATTCAATGAATGGATCGTGGCGACAGCTTCTTCAGATACCACCATTGGACTCTTTGATATACGAAAGCTCACCTCACCTGTGCATGCATTGTCTAGTCACAATGAGGAGGTGTTTCAGGTTGAGTGGGATCCTAATCATGAAACTGTGTTGGCATCTTCATCTGATGATAGAAGGTTGATGGTTTGGGACCTTAACAGGGTCGGTGATGAGCAGCTGGAGGGAGAAGCAGAGGATGGGCCTCCAGAACTTCTCTTCTCCCATGGAGGACACAAGGCTAAGATATCAGACTTCTCATGGAACAATAACGAACCATGGACGATTTCAAGTGTGGCAGATGACAATACAATCCAGGTCTGGAAAATGGCTGAGAGTATATACCGTGATGAGGATGAATTACCTGCTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38266.p1 GENE.R_Transcript_38266~~R_Transcript_38266.p1 ORF type:complete len:411 (+),score=98.31,CAF1C_H4-bd|PF12265.4|8.8e-24,CAF1C_H4-bd|PF12265.4|1.5e+04,WD40|PF00400.28|0.45,WD40|PF00400.28|0.43,WD40|PF00400.28|0.57,WD40|PF00400.28|0.0068,WD40|PF00400.28|0.38 R_Transcript_38266:56-1234(+)
MADEGEAPPTEEQLIEEFAVWKKNTPVLYDVVICHLLEWPSLTVQWLPTPPQINPDTSLAVHSLLLGTHTSDDTPNYLMVADVHLPSDSGPCPSLPKVEITKKFEVDGEVNRARCMPQNPNLIAAKTCGVEVYVFDTAKEVSSGCNPDLRLTGHEKEGYGLSWNPFKEGYLLSGSNDCNICLWDVSSMPQSGVLDARNFYKAHENIVEHVAWHTKNENLFGSVGDDGRLMIWDLRSDKPEHSVVAHEKEVNYLSFSSFNEWIVATASSDTTIGLFDIRKLTSPVHALSSHNEEVFQVEWDPNHETVLASSSDDRRLMVWDLNRVGDEQLEGEAEDGPPELLFSHGGHKAKISDFSWNNNEPWTISSVADDNTIQVWKMAESIYRDEDELPAE*

Click here to download the sequence:
Link to NCBI Protein BLAST