Transcript Information: R_Transcript_38298.p1


Annotated TAIR IDAT1G54150.1
Annotated Gene NameE3 Ubiquitin ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20215480-20217303 | Forward length=383
E-Value3E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9486918966316
Replicate 23.3403205207747
Replicate 35.8754294483638
Condition 2: 8 Hour
Replicate 16.2804653598454
Replicate 28.1312297604311
Replicate 310.31341512522
Condition 3: 24 Hour
Replicate 17.7519868561079
Replicate 26.229894556754
Replicate 36.7510777443352


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38298.p1 GENE.R_Transcript_38298~~R_Transcript_38298.p1 ORF type:complete len:308 (+),score=50.25,GIDE|PF12483.4|2.2e-36 R_Transcript_38298:149-1072(+)
ATGTCGTCGGCAGGAGAGCAAGCAGCGGCAGCGATAGTAACGCAAGTAGCCCTAGCAGCTGACGGAGCAGTACTAGGGCTAGCCCTAGCCTACGTGGCAGTTCGAAGTTTCATCAAATTCGCTAATTCATCCTCAGCCTTGAGGAAAATCGCCGACGCTCCTTCCGTACATGTTTCCGATCTCCGATCACTTATTAACGCCGGAGGTGAAGAAGAAACAGATGGAGATGGAGGAGGAGAGAGAGTGTTGGAGAGGCTGGTGGTTGTGAGTGGAATCGTTGAGTCGAAATCGGCTGTTAAAGGAAGCTGGAAAACCTTGTGGCCTAATGACGTTCTTGTTTCGGCTGATTCCGGTGAACGTGCTGTCGTCATTCAGCGCTCTCAAAAGTGTATATACAACGAATGGAGAGGATTTTTCGGATGGTATCCTGATGTCCGTGCAGTCCTGGCAAAAGCCTGGAGAGAACAAGGAACTAGTTCTGTGAGAACGGTCCCATTTGTTCTTGTTGGAGATCTTCAACAGCCACAATCTGATTATATTGTTGTTGACATGGATGGTTCAAACCATCCACTTCCTCTGACAACAGTCTACCATAAAATGCAACCAATTCAAGCAACTCCTTACACCTTTCTGCAGGCGCTCTTTGGACATGAATACCCAGTTGGCATGCTTGATGAGGAGAAAATCCTTCCACTTGGGAAGGATGTCACTGCAATTGGAATTTGCTCTTTAAGAGACGGTGTTCCAGAGATTAAGTCATGCAAAGATCTTCCTTACTTTCTGTCAGGACTAACCAAGGATCAGTTGGTGGTTGAACTCACATTTAGGTCAAAGATCTTACTATGGAGTGGTATTATTGTTGGGTCGGTGTCACTTGGCATACTTGGGTATGCAATTGTGAGGTATCTCATGGTTTTGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38298.p1 GENE.R_Transcript_38298~~R_Transcript_38298.p1 ORF type:complete len:308 (+),score=50.25,GIDE|PF12483.4|2.2e-36 R_Transcript_38298:149-1072(+)
MSSAGEQAAAAIVTQVALAADGAVLGLALAYVAVRSFIKFANSSSALRKIADAPSVHVSDLRSLINAGGEEETDGDGGGERVLERLVVVSGIVESKSAVKGSWKTLWPNDVLVSADSGERAVVIQRSQKCIYNEWRGFFGWYPDVRAVLAKAWREQGTSSVRTVPFVLVGDLQQPQSDYIVVDMDGSNHPLPLTTVYHKMQPIQATPYTFLQALFGHEYPVGMLDEEKILPLGKDVTAIGICSLRDGVPEIKSCKDLPYFLSGLTKDQLVVELTFRSKILLWSGIIVGSVSLGILGYAIVRYLMVLH*

Click here to download the sequence:
Link to NCBI Protein BLAST