Transcript Information: R_Transcript_38322.p1


Annotated TAIR IDAT4G05160.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2664451-2666547 | Forward length=544
E-Value2.2E-212
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.547415895332
Replicate 26.5535172273535
Replicate 310.201012368863
Condition 2: 8 Hour
Replicate 17.447986753337
Replicate 28.668731528889
Replicate 39.238195464849
Condition 3: 24 Hour
Replicate 17.6678163305254
Replicate 26.5771149773093
Replicate 36.9187774258781


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38322.p1 GENE.R_Transcript_38322~~R_Transcript_38322.p1 ORF type:complete len:503 (+),score=95.58,AMP-binding|PF00501.24|1.4e-103 R_Transcript_38322:359-1867(+)
ATGGAGAGTTCTGGGTATGGCCGAGATGGGATATACAGGTCACTGAGACCACCATTGATCATACCCACAAACCAGAATCTTTCAATGGTTTCATTTCTCTTCAGAAACATCTCGTCATACCCTGAAAAACCAGCCCTTATTGACTCAGATTCAGGTCAAACCATCAACTTTTCTGAGCTCAAATCCTTGGTTGCAAAGCTTTCTCATGGGCTTACCCATCTGGGTATCAAAAAAGGTGATGTTGTTCTCATGTTTGCTCCAAATTCAATCCAATACCCCATAACTTTTCTAAGTATTGTTGCAATTGGTGCTATTGCAACCACTGTTAATCCTATGTACACAGTGTCAGAGATTAAGAAACAGGTGGTTGATTGTAAGCCAAAGTTGGTAGTCACTGTGCCAGAATTGTGGGACAAAGTTAAGGATTTCAACTTGCCTGGTTTGATCTTAGGGGACAAGGGTAATAATGGGTTTTACTCAAAAAGTGTCTTTTTCCATGATTTGGTTAATGGGTCTGCCTTAGATTTACCAGTGGTGCAAATTAAGCAAAGTGATACAGCTGCTTTGTTGTATTCTTCTGGTACTACTGGTGTTAGTAAAGGTGTGGTTTTGACTCATAGGAATTTCATTTCTGCTTCAATTATGGCTTCACAGGGCCAAGAGGTTGAGGGTGAGAAGCATAACTTGTTCTTGTGTGTGCTTCCTATGTTTCATGTGTTTGGTCTGTCTGTGATTTTGTATAGTCAGTTGCAACGGGGTAATGGGGTTGTTACAATGGCGAAATTTGACTTCGAGTTGATGTTGAAAAGTATTGAGAAGTATAAGGTTACTCATTTGTGGCTTGTTCCTCCTATCATACTTGCTTTGGCTAAGTATAGTGTTGTTAAGAAGTATGACCTTTCTTCTCTGAAACAAATTGGGTCTGGGGCTGCCCCTCTTGGAAAGGAGGTTATGGTTGAGTGTTCTAAAGTTGTGCCTCAGGCTCAGATTGTTCAGGGGTATGGTATGACAGAAACCTGTGGAATTGTCTCTCTCGAACACCCAAGATTAGGTGGTCGATTTTCTGGTTCAACTGGAATGCTGGTTGCGGGTGTTGAAGCTCAGATTGTTCAGGTAGATACAATGAAGCCTCTTCCTCCTAAGGAAATGGGCGAAATATGGGTTCGTGGGCCCAATATGATGACTGGTTACTTCAATAATCCAAAAGCCACCAAGCTAACCATTGATAATCAAGGATGGGTGCATACCGGAGATCTTGGATATTTCGATGAGCAAGGGCAGTTATATGTGGTTGATAGACTTAAAGAACTTATCAAGTACAAGGGCTTTCAGGTATTCCACGTCATTGCTAAAATAATTATCTGGTTCAACAAACTCCTAAAACTTGATTTATCCTGTATGTATTTATCACGAGCAGATCAAGAAACTTTTACGTTTACCCCCACTGATATCAATAGGTTGCACCTGCTGAACTTGAAGCTATTCTTCTGTCTCATCCTGAAATATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38322.p1 GENE.R_Transcript_38322~~R_Transcript_38322.p1 ORF type:complete len:503 (+),score=95.58,AMP-binding|PF00501.24|1.4e-103 R_Transcript_38322:359-1867(+)
MESSGYGRDGIYRSLRPPLIIPTNQNLSMVSFLFRNISSYPEKPALIDSDSGQTINFSELKSLVAKLSHGLTHLGIKKGDVVLMFAPNSIQYPITFLSIVAIGAIATTVNPMYTVSEIKKQVVDCKPKLVVTVPELWDKVKDFNLPGLILGDKGNNGFYSKSVFFHDLVNGSALDLPVVQIKQSDTAALLYSSGTTGVSKGVVLTHRNFISASIMASQGQEVEGEKHNLFLCVLPMFHVFGLSVILYSQLQRGNGVVTMAKFDFELMLKSIEKYKVTHLWLVPPIILALAKYSVVKKYDLSSLKQIGSGAAPLGKEVMVECSKVVPQAQIVQGYGMTETCGIVSLEHPRLGGRFSGSTGMLVAGVEAQIVQVDTMKPLPPKEMGEIWVRGPNMMTGYFNNPKATKLTIDNQGWVHTGDLGYFDEQGQLYVVDRLKELIKYKGFQVFHVIAKIIIWFNKLLKLDLSCMYLSRADQETFTFTPTDINRLHLLNLKLFFCLILKY*

Click here to download the sequence:
Link to NCBI Protein BLAST