Transcript Information: R_Transcript_38323.p1


Annotated TAIR IDAT4G05160.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:2664451-2666547 | Forward length=544
E-Value1.5E-263
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.643324406707
Replicate 256.094012243913
Replicate 363.492886769298
Condition 2: 8 Hour
Replicate 141.930340160125
Replicate 252.313677183182
Replicate 354.286449573402
Condition 3: 24 Hour
Replicate 149.621234545965
Replicate 242.432845026955
Replicate 346.577360437609


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38323.p1 GENE.R_Transcript_38323~~R_Transcript_38323.p1 ORF type:complete len:539 (+),score=125.37,AMP-binding|PF00501.24|4.8e-104,AMP-binding_C|PF13193.2|9.9e-16 R_Transcript_38323:400-2016(+)
ATGGAGAGTTCTGGGTATGGCCGAGATGGGATATACAGGTCACTGAGACCACCATTGATCATACCCACAAACCAGAATCTTTCAATGGTTTCATTTCTCTTCAGAAACATCTCGTCATACCCTGAAAAACCAGCCCTTATTGACTCAGATTCAGGTCAAACCATCAGCTTCTCTGAGTTCAAATCCTTGGTTGCAAAGCTATCTCATGGGCTTACCCATCTGGGTATCAAAAAAGGTGATGTTGTTCTCATGTTTGCTCCAAATTCAATCCAATACCCTATAACTTTTCTAAGTATTGTTGCCATTGGTGCTATCGCTACCACTGTTAATCCTATGTACACAGTGTCAGAGATTAAGAAACAGGTGGTTGATTGTAAGCCAAAGTTGGTAGTCACTGTGCCAGAATTGTGGGACAAAGTTAAGGATTTCAACTTGCCTGGTTTGATCTTAGGGGACAAGGGTAATAATGGGTTTTACTCAAAAAGTGTCTTTTTCCATGATTTGGTTAATGGGTCTGCCTTAGATTTACCAGTGGTGCAAATTAAGCAAAGTGATACAGCTGCTTTGTTGTATTCTTCTGGTACTACTGGTGTTAGTAAAGGTGTGGTTTTGACTCATAGGAATTTCATTTCTGCTTCAATTATGGCTTCACAGGGCCAAGAGGTTGAGGGTGAGAAGCATAACTTGTTCTTGTGTGTGCTTCCTATGTTTCATGTGTTTGGTCTGTCTGTGATTTTGTATAGTCAGTTGCAACGGGGTAATGGGGTTGTTACAATGGCGAAATTTGACTTCGAGTTGATGTTGAAAAGTATTGAGAAGTATAAGGTTACTCATTTGTGGCTTGTTCCTCCTATCATACTTGCTTTGGCTAAGTATAGTGTTGTTAAGAAGTATGACCTTTCTTCTCTGAAACAAATTGGGTCTGGGGCTGCCCCTCTTGGAAAGGAGGTTATGGTTGAGTGTTCTAAAGTTGTGCCTCAGGCTCAGATTGTTCAGGGGTATGGTATGACAGAAACCTGTGGAATTGTCTCTCTCGAACACCCAAGATTAGGTGGTCGATTTTCTGGTTCAACTGGAATGCTGGTTGCGGGTGTTGAAGCTCAGATTGTTCAGGTAGATACAATGAAGCCTCTTCCTCCTAAGGAAATGGGCGAAATATGGGTTCGTGGGCCCAATATGATGACTGGTTACTTCAATAATCCAAAAGCCACCAAGCTAACCATTGATAATCAAGGATGGGTGCATACCGGAGATCTTGGATATTTCGATGAGCAAGGGCAGTTATATGTGGTTGATAGACTTAAAGAACTTATCAAGTACAAGGGCTTTCAGGTTGCACCTGCTGAACTTGAAGCTATTCTTCTGTCTCATCCTGAAATATTAGAAGCAGCTGTTATCCCTTTTCCTAATGCTGAAGCAGGTGAAGTACCCGTTGCCTATGTGGTTCGAGCTCCTAAGAGTTCTTTGAAAGATGAAGATGTCATGAAATTTGTTGCTGATCAGGTTGCACCTTACAAGAGGTTGAGGAAGGTGACATTTCTAAGTAGTATCCCAAAATCTGCCTCAGGAAAGCTCCTCAGACGAGAGCTTATCGAGAAGTCGCGATCCAAGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38323.p1 GENE.R_Transcript_38323~~R_Transcript_38323.p1 ORF type:complete len:539 (+),score=125.37,AMP-binding|PF00501.24|4.8e-104,AMP-binding_C|PF13193.2|9.9e-16 R_Transcript_38323:400-2016(+)
MESSGYGRDGIYRSLRPPLIIPTNQNLSMVSFLFRNISSYPEKPALIDSDSGQTISFSEFKSLVAKLSHGLTHLGIKKGDVVLMFAPNSIQYPITFLSIVAIGAIATTVNPMYTVSEIKKQVVDCKPKLVVTVPELWDKVKDFNLPGLILGDKGNNGFYSKSVFFHDLVNGSALDLPVVQIKQSDTAALLYSSGTTGVSKGVVLTHRNFISASIMASQGQEVEGEKHNLFLCVLPMFHVFGLSVILYSQLQRGNGVVTMAKFDFELMLKSIEKYKVTHLWLVPPIILALAKYSVVKKYDLSSLKQIGSGAAPLGKEVMVECSKVVPQAQIVQGYGMTETCGIVSLEHPRLGGRFSGSTGMLVAGVEAQIVQVDTMKPLPPKEMGEIWVRGPNMMTGYFNNPKATKLTIDNQGWVHTGDLGYFDEQGQLYVVDRLKELIKYKGFQVAPAELEAILLSHPEILEAAVIPFPNAEAGEVPVAYVVRAPKSSLKDEDVMKFVADQVAPYKRLRKVTFLSSIPKSASGKLLRRELIEKSRSKL*

Click here to download the sequence:
Link to NCBI Protein BLAST