Transcript Information: R_Transcript_38333.p1


Annotated TAIR IDAT5G57990.1
Annotated Gene Nameubiquitin-specific protease 23
Annotated Gene Symbol(s)UBP23
Annotation TypeOrtholog
Chromosome Positionchr5:23470218-23473997 | Reverse length=859
E-Value1.1E-182
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.639746840815
Replicate 27.3809520234768
Replicate 310.710658876017
Condition 2: 8 Hour
Replicate 110.613327127304
Replicate 210.480868394276
Replicate 315.384470889862
Condition 3: 24 Hour
Replicate 115.383559109349
Replicate 212.896931819973
Replicate 313.994186614376


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38333.p1 GENE.R_Transcript_38333~~R_Transcript_38333.p1 ORF type:complete len:879 (+),score=167.92,UCH|PF00443.25|7.5e-50,UCH_1|PF13423.2|1.1e-19,UCH_1|PF13423.2|1.6e+04 R_Transcript_38333:150-2786(+)
ATGTCTCCGCCAGTTCCTACTCCCAAACTAGTATCAGGGTCGTCCTTAGGTAGGAAAGTAGAGTTCCATTTGGCAAGGAAATCTGTCTCCTCTTTTCCTGCCACTTGCAGTAATTTCAAGATCGAAACTTTGAATCCTGGTTCTTCTTCTTCAATATCTCAGCCAGTCGCTCCCAAACCCTCTAATAATAAACCCACTGATTCCTTTGATTTTCTTGATGCCGAACTCTCTTTCCACATCCCTTTCCGTCGTATTGGTGCTGGGCTGGAGAATCTTGGGAATACATGTTTTCTGAACTCTGTGATACAGTGCCTCACATACACAGAGCCATTAGTAGCATATCTTCAAAGTGGCAAGCATCAGACTACTTGTCGGATTGCTGGTTTTTGCGCATTATGTGCTATCCAAAAACATGTTAGTCGTGCACTACAGTCTACGGGGAGAATATTAGCACCAAAAGATCTTGTGTCAAACTTGAGATGCATATCTCGGAACTTTCGAAATTCCAGGCAGGAGGATGCACATGAATACATGATACATCTACTGGAATCAATGCACCAATGCTGCTTACCTTCAGGATTGCTTGCAGAATCCCCCGGTGCTTATGACAAAAGTTTAGTCCACAAGATCTTTGGGGGTAGCCTACGCAGCCAGGTCAAATGCTTGCAATGCTCTTATTGTTCAAATACATTTGATCCTTTCTTAGATTTGAGCCTTGAAATAGTGAAGGCAGATTCCCTGAATAAGGCTCTGATGCATTTCACTGCTGCTGAGCAATTGGATGGTGGAGAGAGGCAGTATAAATGTGAAAGATGCAAGCAGAAAGTGAGGGCACTGAAACAACTCACGGTGTATAAAGCACCATATGTCCTGACTATCCATTTGAAACGTTTTCGTTCACACTTTTCTGGTCAAAAGATTGACAAGAAAGTTCAATTTGGTTCTACGTTGGATTTGAAACCTTTTGTCAGTGGAGCTTATGAGGGCGATTTGAAGTATACGCTTTACGGAGTTCTGGTTCATGCTGGTTGGAGCACGCATTCTGGTCATTATTATTGCTTCGTTCGTACATCAAGTGGCTTATGGTACTCCCTTGATGACTGTAGGGTTACTCAAGTTAGTGAGAAGACTGTTCTGGAGCAGAAAGCATACATGCTGTTCTATGTTCGTGATAGGAAGAACTTTACTCACAAGAAAGCTATGGATGTCATTCAGAAGGAGAACTTGATCTCAACAATTCGAAATGCTTCAGGCTCTTGTTCCATCCCTGGTGCTAAGTCCACCCAAAACAGTACCCTAGATAAGAATTCAAGGGAAGCAATTTTGTCTGGTGTGTTTGTGAAGGATGCTGAAAGAATCAACACTTCTGGGGCTCCTGCTCAACAAAATACATCTAAAATGTCTACATCCAATAACACTTTAATGAAGCAAGATATGAATCAGAAACCAAATTGCACAGTGTCATCTGGAACCTCAAATGTAAAAAGGGAAGATTCTTTGCTCTCAGAGTCTGATTTAGATGGAGGTGTGCTTGCAAAAACAAAATGTAAGAATGCTAGTCATGCCAGGAATTCTATAAATTCAGAGCCTACTACCAACTGTGGGGTGTTCAATAACTCTCAGAGTGATATTCCTGTGTCTGCTGCCAAACCGTGTGTTAATGATAGCTCCTCAAATGTTGCCACAGATGGATCCAATAAAGCTTCCGATATGGTCATTACCACTGCAGACACAAAGGTTCATGATGCTCAGCCTAGCATTAAAAATGGTTGTGAGCCAGATAAAACTGGCCTATTAGCTCAACCAACCAGTGAAAGTAGAAGCAAGGAGGGAGCTGTGGAGGTCACATCTGGCACCCATTCAATCTCGAGAAATTCAAGAAAACTGCGAAGTTCCAATGGATCACTTCCTCAGAAACCAGTTCGTTGTGCCCTACGTCGAACATTGATGAAAAAAATGTTCAAGCCTAGGGTTTTAGGTTTTCATCTGAGCACGAAGATGCTGTATGGAGCTTCATTGAGCTTGAGGAAGATGAGAAAAGGCAAAAGGGTGAAGGTGAGCAAAGAAAAGGTTCTGCAAAAACACTTGTTGAAGGAGGATTGTGTCTCTGAGGAGACATGCGCTTTGACATCTGCTGCACTGAGAGAGGAAGAGCATAATTATGCTAAGAAGTGTGCCAAAAATTTGTATCACAAATCACCCACTATTAGCTCTGGTGGGGTGCTTAATGACAGATTAACTTGCAGTAAAACTGTGCTGGCCACTGGTAAGCTGCCTGGAGAAAGTGCTAGCACTTCCTTGGAAACAATCGAAGCAAATATCGGTGCAAAACAACTAAGTTCTCAGTTGCAAACTGGAGTAACTAGTGCTCACACCAGAGAACTAGGGGAGGTTACTGTTGTGCGCTGGGAAGGAATAGAATCTCCGTCAGAAATCATGGAATCAAAGGGTCAAGACAGCTTGAGCATTGGTTATGTCTTAGATGACTGGGATGAAGAATATGACCGTGGTAAACGGAAAAAGGTCAGAGGTTTGAGAACTAATTTTGATGGTTCAAACCCTTTCCAAGTAATTGCAGCGAAGAAAGCTAAAACGAATGCAAAGACAGAACAGTACAACCAACCATTCAGGATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38333.p1 GENE.R_Transcript_38333~~R_Transcript_38333.p1 ORF type:complete len:879 (+),score=167.92,UCH|PF00443.25|7.5e-50,UCH_1|PF13423.2|1.1e-19,UCH_1|PF13423.2|1.6e+04 R_Transcript_38333:150-2786(+)
MSPPVPTPKLVSGSSLGRKVEFHLARKSVSSFPATCSNFKIETLNPGSSSSISQPVAPKPSNNKPTDSFDFLDAELSFHIPFRRIGAGLENLGNTCFLNSVIQCLTYTEPLVAYLQSGKHQTTCRIAGFCALCAIQKHVSRALQSTGRILAPKDLVSNLRCISRNFRNSRQEDAHEYMIHLLESMHQCCLPSGLLAESPGAYDKSLVHKIFGGSLRSQVKCLQCSYCSNTFDPFLDLSLEIVKADSLNKALMHFTAAEQLDGGERQYKCERCKQKVRALKQLTVYKAPYVLTIHLKRFRSHFSGQKIDKKVQFGSTLDLKPFVSGAYEGDLKYTLYGVLVHAGWSTHSGHYYCFVRTSSGLWYSLDDCRVTQVSEKTVLEQKAYMLFYVRDRKNFTHKKAMDVIQKENLISTIRNASGSCSIPGAKSTQNSTLDKNSREAILSGVFVKDAERINTSGAPAQQNTSKMSTSNNTLMKQDMNQKPNCTVSSGTSNVKREDSLLSESDLDGGVLAKTKCKNASHARNSINSEPTTNCGVFNNSQSDIPVSAAKPCVNDSSSNVATDGSNKASDMVITTADTKVHDAQPSIKNGCEPDKTGLLAQPTSESRSKEGAVEVTSGTHSISRNSRKLRSSNGSLPQKPVRCALRRTLMKKMFKPRVLGFHLSTKMLYGASLSLRKMRKGKRVKVSKEKVLQKHLLKEDCVSEETCALTSAALREEEHNYAKKCAKNLYHKSPTISSGGVLNDRLTCSKTVLATGKLPGESASTSLETIEANIGAKQLSSQLQTGVTSAHTRELGEVTVVRWEGIESPSEIMESKGQDSLSIGYVLDDWDEEYDRGKRKKVRGLRTNFDGSNPFQVIAAKKAKTNAKTEQYNQPFRI*

Click here to download the sequence:
Link to NCBI Protein BLAST