Transcript Information: R_Transcript_38340.p1


Annotated TAIR IDAT4G32010.1
Annotated Gene NameHSI2-like 1
Annotated Gene Symbol(s)HSL1, HSI2-L1, VAL2
Annotation TypeOrtholog
Chromosome Positionchr4:15481231-15484897 | Forward length=780
E-Value7E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2228430202468
Replicate 21.6718365671057
Replicate 31.5020811538461
Condition 2: 8 Hour
Replicate 11.2615668122702
Replicate 21.9899613816512
Replicate 32.8481449919577
Condition 3: 24 Hour
Replicate 12.311910329722
Replicate 21.9627630862809
Replicate 32.8705186474619


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38340.p1 GENE.R_Transcript_38340~~R_Transcript_38340.p1 ORF type:3prime_partial len:427 (+),score=61.20,B3|PF02362.17|1.1e-10 R_Transcript_38340:1260-2537(+)
ATGTCGTCGTCGTCGTTACAGCAGGAAGCACCACCAAAGTTTTGCTTCAATCCAGAGTGTCAGGACTCGAAATCCGACCGTTGGACCAAAGGCTGGCGTCTTCGTAACCTTAACTTCGCTCGCCTTTGTTACCGTTGCGGATCTATTTACGAAGCAGGAAAATTCTGTGAAACCTTCCACATCCATGCATCTGGTTGGAGGTGTTGTGAGACTTGTGGGAAGCGAGTTCACTGTGGATGTATTGTCTCGATGCATGCTTTTGTTGTATTGGACGCTGGGGGAATTGAGTGCACAGTATGCACTAGGAAAAATTCGAACTTGACACCAAATCCAATATGGCCACCTCAATCCTTACCTCGCTGGCCTACAGCATGTGTTTCTGTGAAGGACTGCAATCAAATTGGCAGATCTGATTCTCCAGCCACTTGGCATCAGCCCATGAGCTTATTTAACAAAAATCCTGCTTATCCTGATTCGCAGTCCAGATCATACTTTGAACATGACAAGTCCATTCGGTATGAGAGACTTGTGTACTGTGATAGATTGGCTGGATTTGCATCAGAAAGAAATCAAACTCGGAACTTGTCATTTTGTAATGGGAGCCTTCAGCATAATGGGTCATCAGAAAGACTTGAATATGGAAAATCAGTGTTCAGTCAGAAAGAAGAAATGTGCTCGTGTCTTACAATTTCTGGGCATCAATCGCTGCAGAAGGATGGGCAATCTGTAATGCATTTGGATAAGGCTTTTAGTTCTTCACCAGTCAGCCAAGCAGAAAACCAACGACAGGGTTGTGGTGTGCATTTTCAGCAGCGTAGGCCCCAAGATGTTATAGGAAAGAAACTTAGCTCTAATTCTCATAGTGGAACTGACTTTTCACGTCAGACTCAGATATGGAACTGTAAGCCAGTTGATGTGCATTCACAAAAGGAGTTGCTTCCCCGATCCTGGCCCAAGATACCTGATAATGAGTTGCAACAGATTTCAGGCGGTTACAAGTCTGTAATCACTCCCTTATTTGAGAAGATGTTAAGTGTTAGTGATGCTGGTCGAGTTGGACGTTTGGTGCTGCCAAAGAAATGTGCTGAGAGTTACTTCCCTCGAATTACACATCCAGAAGGGTTGCCTCTCGAAGTCCAAGATATAAAGGGCAAAGAATGGCTATTCCAGTTCCGGTTCTGGCCTAATAATAACAGCAGAATGTATGTTCTGGAAGGGATAACTAGCTGTATTCAGTCATTGCAATTACAAGCAGGAGACATAGGGCATTCCAGCTGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38340.p1 GENE.R_Transcript_38340~~R_Transcript_38340.p1 ORF type:3prime_partial len:427 (+),score=61.20,B3|PF02362.17|1.1e-10 R_Transcript_38340:1260-2537(+)
MSSSSLQQEAPPKFCFNPECQDSKSDRWTKGWRLRNLNFARLCYRCGSIYEAGKFCETFHIHASGWRCCETCGKRVHCGCIVSMHAFVVLDAGGIECTVCTRKNSNLTPNPIWPPQSLPRWPTACVSVKDCNQIGRSDSPATWHQPMSLFNKNPAYPDSQSRSYFEHDKSIRYERLVYCDRLAGFASERNQTRNLSFCNGSLQHNGSSERLEYGKSVFSQKEEMCSCLTISGHQSLQKDGQSVMHLDKAFSSSPVSQAENQRQGCGVHFQQRRPQDVIGKKLSSNSHSGTDFSRQTQIWNCKPVDVHSQKELLPRSWPKIPDNELQQISGGYKSVITPLFEKMLSVSDAGRVGRLVLPKKCAESYFPRITHPEGLPLEVQDIKGKEWLFQFRFWPNNNSRMYVLEGITSCIQSLQLQAGDIGHSSC

Click here to download the sequence:
Link to NCBI Protein BLAST