Transcript Information: R_Transcript_383548.p1


Annotated TAIR IDAT5G36000.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14139996-14141892 | Forward length=355
E-Value2.9E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.12497797866844
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.32413590393548
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_383548.p1 GENE.R_Transcript_383548~~R_Transcript_383548.p1 ORF type:internal len:168 (+),score=30.67 R_Transcript_383548:3-503(+)
CTCTATGCATCAGCTTTTGATGGCAGTCATTCATACTTTTTCCGCCAGCAGGAGAAACACATAGACTGGATGCGTATTGGTGCTTTCTTCCTGGAGTCGCCAGCAGCAATCTTGACCGAGAAACTGACCTTCCCTACAAAGATCCCTCTCAAGGAGGCTCTTGACAAGGTGTTGCCATCCAGTGGCTTATGTGTGGTCACTAACATCAAAACTGGAATTTGGATAGCCGATCTGCAGCTTGTTCGCTGTCCTGTCTGTGACCTCAACACATGTGACGGAACAATGCAGACACTAGAAGCAAGGCACTTTGAGCTGTTCCTATGTGAAGGTTACCAAGATGAAAGCTGGAACTACACACTGATTGGGTCTCATGAGACCAGAAAACACGTCGAAGGAGCTTCGGGAGCCATATTTGATCTGAAGCACCTCGAAGATGCTTCAACGGCAGAGGTGTTCAAAACCAAGTCATGGATAGCAAAACATAATGACTGGCAGCCAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_383548.p1 GENE.R_Transcript_383548~~R_Transcript_383548.p1 ORF type:internal len:168 (+),score=30.67 R_Transcript_383548:3-503(+)
LYASAFDGSHSYFFRQQEKHIDWMRIGAFFLESPAAILTEKLTFPTKIPLKEALDKVLPSSGLCVVTNIKTGIWIADLQLVRCPVCDLNTCDGTMQTLEARHFELFLCEGYQDESWNYTLIGSHETRKHVEGASGAIFDLKHLEDASTAEVFKTKSWIAKHNDWQPK

Click here to download the sequence:
Link to NCBI Protein BLAST