Transcript Information: R_Transcript_383549.p1


Annotated TAIR IDAT5G36000.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:14139996-14141892 | Forward length=355
E-Value2.1E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.23099872591741
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.21658308705381
Replicate 20.20806848009979
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_383549.p1 GENE.R_Transcript_383549~~R_Transcript_383549.p1 ORF type:5prime_partial len:106 (+),score=18.83 R_Transcript_383549:3-320(+)
CTCTATGCATCAGCTTTTGATGGCAGTCATTCATACTTTTTCCGCCAGCAGGAGAAACACATAGACTGGATGCGTATTGGTGCTTTCTTCCTGGAGTCGCCAGCAGCAATCTTGACCGAGAAACTGACCTTCCCTACAAAGATCCCTCTCAAGGAGGCTCTTGACAAGGTGTTGCCATCCAGTGGCTTATGTGTGGTCACTAACATCAAAACTGGAATTTGGATAGCCGATCTGCAGCTTGTTCGCTGTCCTGTCTGTGACCTCAACACATGTGACGGTGAGCAAGCAACCCATAAATGCCTCTCCGTCCTCTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_383549.p1 GENE.R_Transcript_383549~~R_Transcript_383549.p1 ORF type:5prime_partial len:106 (+),score=18.83 R_Transcript_383549:3-320(+)
LYASAFDGSHSYFFRQQEKHIDWMRIGAFFLESPAAILTEKLTFPTKIPLKEALDKVLPSSGLCVVTNIKTGIWIADLQLVRCPVCDLNTCDGEQATHKCLSVLF*

Click here to download the sequence:
Link to NCBI Protein BLAST