Transcript Information: R_Transcript_38386.p2


Annotated TAIR IDAT1G28690.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10080042-10081604 | Reverse length=520
E-Value1.7E-202
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.712582646491
Replicate 22.1378051332958
Replicate 32.915402966783
Condition 2: 8 Hour
Replicate 12.1369482135778
Replicate 23.3338042017768
Replicate 34.6534129044992
Condition 3: 24 Hour
Replicate 14.2158882363602
Replicate 22.7669324789997
Replicate 33.7010118834208


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_38386.p2 GENE.R_Transcript_38386~~R_Transcript_38386.p2 ORF type:complete len:550 (+),score=100.42,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|73,PPR_2|PF13041.2|5e-10,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|3e-09,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|1.9,PPR_2|PF13041.2|1.3e+03,PPR|PF01535.16|15,PPR|PF01535.16|4.9e-05,PPR|PF01535.16|0.0097,PPR|PF01535.16|0.00026,PPR|PF01535.16|1.7,PPR|PF01535.16|1e+04,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0086,PPR|PF01535.16|0.34,PPR|PF01535.16|3e+03,PPR|PF01535.16|1.6,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|8.9e-06,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|23,PPR_3|PF13812.2|64,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|22,PPR_1|PF12854.3|6.4,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|0.00053,PPR_1|PF12854.3|6.7,PPR_1|PF12854.3|47,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.0081,PPR_1|PF12854.3|0.069,PPR_1|PF12854.3|0.65 R_Transcript_38386:344-1993(+)
ATGAGACATGCCAAAGTGATTCAAGTCCGATATCTATGCCTTTCATCATTACATACTCCGAAACTTTCATCATTACATAATCCGAAACTGCAAGTTTTCTGTGGTCCAATTTCCTTGCCCACAGATGACTACCTTTCAAATCCTACTTCAACCTCTCTAGCAACCACTCTTCAACAGTATATAAATTCAGGCTCACCTTCTCATGGTTTAAAGATCCATAGTCATATTCTAAAAACGGGTTATAAACCCAATACGAACATTACGATCAAACTCCTCATACTACATCTGAAATGTGGTTCCTTGAGCTATGCTCGCCAATTGTTTGAAGAAATGCCTCAGCCTACTATGTCTGCTTATAATTATTTGCTCAATGCTTATGTAAAATATGGTCAATTTGAGGAAGCATTTGCTTTGGTCCGCCAGATGTGTGACTCTAATGGAAAGCCTGACAACTTTACACATTCGTTGATTCTGAAAGCATGGACTTCGGCACCTTGTCCCTCGTTGTCATCATGTGACGTGGGAAGACAGGTGCATGCTCAGATTATAAAATGTGATGACGATCAGGAGGATGTTATTCTTTTTGCTACCTTAATTGATTCATATGTTAAATCTAGAAGGCTTGATTATGCTAGGCGTGTGTTTGATTTAATGTCGGTGAAGAATGCAATATACTCAACTTCATTGATATCTGGTTATTTGAACAATGGCTTTGCGGAAGATGCTGAGTCACTGTTTAAGGAAATAGCGGAGAAAGATGATGTGGTCTTTAATGCTATGATTGAAGGTTATAGTAGATCAATTGATACCGCTAAGAAGTCAATTGAAGTCTATATAGAGATGCAGAGATTGGGGTTTGTGCCTACAATCTCAACATTTGCTAGTCTTATTGGAGCATGTTCTCTACTGACATCAGTTGAACTTGGTCAACAAGTTCAGAGTCACCTTGTAAAGACTAGGTACTTCCTGGATGTAAAAATTGGGAGTGCTCTTATAGACATGTACTCCAAATGTGGGAAGATCGAGGATGCTCGTCAAATATTTGATCACATGCCTGAAAAGAATATATTTTCGTGTACATCCATGATTGATGGATATGGAAAAAATGGGAAATCCAGTGAAGTGATTGCAATGTTTGGTAAGATGCAGGCAGAGCGTCATATAAAACCTAATTATGTCACATTCCTTTGTGCTATCTCAGCATGTGCATATGCTGGGTTGGTAGACAAAGGCTGGGAGATCTTTGAAAGCATGGAGAAGGATTACTCATTGAAGCCTAGGATGGAACACTATGCTTGCATGGTTGATCTTTTAGGGCGCTCTGGAAATGTGCAACAAGCGTGGGATTTTGTAAAGAGGATGCCAGAAACACCTACTTCAGATGTTTGGGCTGCTTTGCTGAGTTCATGTAGATTGCATGGGGAACTCGAGATAGCAAGTATAGCTGCAGAAGAACTCTTCAAATTGTGTGCTGATGGTCGGCCTGGTTCATATGTTGCTTTATCAAATGCTCTGGCTGCAGCAGGGATGTGGGATTGTGTAAATGAAGTTAGGGAACTGATGAAGCTTAGAGGTATAACAAAAGATGCAGGTTTCAGTTGGACTGGAACTCATGATGGTTCAAATGGTGTCATCCTGGGCCTGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_38386.p2 GENE.R_Transcript_38386~~R_Transcript_38386.p2 ORF type:complete len:550 (+),score=100.42,PPR_2|PF13041.2|1.7e+03,PPR_2|PF13041.2|73,PPR_2|PF13041.2|5e-10,PPR_2|PF13041.2|0.014,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|1.1e-06,PPR_2|PF13041.2|0.0028,PPR_2|PF13041.2|3e-09,PPR_2|PF13041.2|0.016,PPR_2|PF13041.2|1.9,PPR_2|PF13041.2|1.3e+03,PPR|PF01535.16|15,PPR|PF01535.16|4.9e-05,PPR|PF01535.16|0.0097,PPR|PF01535.16|0.00026,PPR|PF01535.16|1.7,PPR|PF01535.16|1e+04,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0086,PPR|PF01535.16|0.34,PPR|PF01535.16|3e+03,PPR|PF01535.16|1.6,PPR_3|PF13812.2|7.9e+02,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|8.9e-06,PPR_3|PF13812.2|0.53,PPR_3|PF13812.2|23,PPR_3|PF13812.2|64,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.25,PPR_3|PF13812.2|0.056,PPR_3|PF13812.2|0.003,PPR_3|PF13812.2|22,PPR_1|PF12854.3|6.4,PPR_1|PF12854.3|0.019,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|0.00053,PPR_1|PF12854.3|6.7,PPR_1|PF12854.3|47,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.0081,PPR_1|PF12854.3|0.069,PPR_1|PF12854.3|0.65 R_Transcript_38386:344-1993(+)
MRHAKVIQVRYLCLSSLHTPKLSSLHNPKLQVFCGPISLPTDDYLSNPTSTSLATTLQQYINSGSPSHGLKIHSHILKTGYKPNTNITIKLLILHLKCGSLSYARQLFEEMPQPTMSAYNYLLNAYVKYGQFEEAFALVRQMCDSNGKPDNFTHSLILKAWTSAPCPSLSSCDVGRQVHAQIIKCDDDQEDVILFATLIDSYVKSRRLDYARRVFDLMSVKNAIYSTSLISGYLNNGFAEDAESLFKEIAEKDDVVFNAMIEGYSRSIDTAKKSIEVYIEMQRLGFVPTISTFASLIGACSLLTSVELGQQVQSHLVKTRYFLDVKIGSALIDMYSKCGKIEDARQIFDHMPEKNIFSCTSMIDGYGKNGKSSEVIAMFGKMQAERHIKPNYVTFLCAISACAYAGLVDKGWEIFESMEKDYSLKPRMEHYACMVDLLGRSGNVQQAWDFVKRMPETPTSDVWAALLSSCRLHGELEIASIAAEELFKLCADGRPGSYVALSNALAAAGMWDCVNEVRELMKLRGITKDAGFSWTGTHDGSNGVILGLN*

Click here to download the sequence:
Link to NCBI Protein BLAST